Burkholderia contaminans: NL30_09585
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Entry
NL30_09585 CDS
T03969
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NL30_09585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_09585
Enzymes [BR:
bcon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NL30_09585
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NL30_09585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
DEAD
AAA_22
MukB
CbiA
ATPase
Motif
Other DBs
NCBI-ProteinID:
AKM41344
LinkDB
All DBs
Position
1:complement(2210203..2212512)
Genome browser
AA seq
769 aa
AA seq
DB search
MNVQDDTLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPAAAARWAARAAFAT
SRATAGGHVCVALGALAQRYEAPLDEVRSALAASGVVAFGTLARGDERPLIVDRHDHLYL
SRYFDYERRLADALVAQAGVAAPDEGLAPDRLRDSLARYFGPATGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRVALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPETSFTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTAAARTRIAQALGIDEAAFVAALPVQDEAA
TAAISAAHPVSAAARAPAPAAAATRKPASRRKVDERQASLFDDEPQDDEVSPTNAAPPPV
AGPVPTETGEPGEAGAAGEAGEAPAWIEVDELAWLDAVELPPFDAGDAALASVTSLLPGE
PVAAPATPAPAPLADCVVWLERNYRFGLDSPIGRLSLAIRSGDVQAALDALPADDSAAAS
FHDDAGESLASSTVERLARRFGAYLDALRDTLAAPVPDPLPLFDALNRFRILCATRSGLR
GAEHVNALVSAHVRHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALPDAHGVL
RVWFRRADGTARAVSPAALPPHETAFALTVHKSQGSEFDEAVLVLPASFGRVLTRELVYT
AVTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEALARRRREASR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcaggacgacacgctcgaatttaccggcggcctcgtcgcgcggctgcccgaa
cccgccgatttcggcattgcactcgcggaaggtttcgcgcgccgcatcggcgatctggct
cgtcgcgccggtgcgccggccgcggccgcgcggtgggcggcacgcgccgcgttcgcgacg
agtcgtgcgactgcgggcggccacgtgtgcgtcgcgctcggcgcgctcgcgcagcgctac
gaagcaccgctcgacgaagtccgctcggcgctcgccgcgagcggcgtggtcgcattcggc
acgctcgcacgcggcgacgaacggccgctgatcgtcgaccgccacgaccacctgtacctg
tcgcgctatttcgactacgaacggcggcttgccgatgcgctcgtcgcgcaggccggtgtg
gccgcgccggacgaaggtctcgcgcccgaccggttgcgcgacagcctcgcgcgttacttc
gggccggcaaccggcgaagtcgactggcagcgcgtcgcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcggcccgggcacgggcaagacgacgaccgtcgtcggcgtg
ctggcctgtctgctcgacgcgcatcctgggctgcgcgtcgcgctggccgcgccgaccggc
aaggccgcgcagcggatgcaggaagcactgcacgcacgggccggcgacctgccgcccgaa
ctcgcggcgcgcctgccggagacgtcgttcacgctgcaccggttgctgggcggcggcggg
gcggccgggttccggcatcaccgagacaatccgctgccgtatgacctgatcgtcgtcgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgatgcgctcgcgccgggt
gcgcggctcgtgctgctcggcgacaaggaccaactggccgcggtcgaggcgggcgccgtg
tttgcagagttgagcgcgcggccggcatttaccgccgcggcgcgcacgcgcatcgcgcag
gcactcggcatcgacgaggcagcattcgtcgcggcgttgccggtgcaggacgaagctgcg
accgcagcgatttccgctgcgcatccggtgagcgcggcggcccgggcgccggcgcctgcc
gcggctgctacgcgcaaacctgcgtcgcgccggaaagtcgatgagcgacaggcatcgctc
ttcgacgacgaaccgcaggatgacgaagtttcgccgaccaacgccgcgccgccgccggtc
gcaggtccggtgccgaccgaaaccggtgagccgggtgaggccggcgcggcaggcgaggca
ggcgaggcccccgcgtggatcgaggtcgacgaacttgcatggctcgacgccgtcgagctg
ccgccgttcgacgcgggcgacgcggcgcttgcatcggtcacgtcgctactgccgggcgaa
ccggtcgccgcgccagccacgcccgcacccgcaccgctcgccgactgcgtggtctggctc
gaacgcaattaccgcttcggtctcgattcaccgatcgggcggctgtcgctcgcgatccgc
agcggcgacgtgcaggccgcgctcgatgcgctgcccgccgacgattcggccgccgcgtca
ttccacgacgatgcgggcgagtcgctcgcgtcgtcgacggtcgagcggctcgcgcggcgc
ttcggtgcttacctcgacgcgttgcgcgacacgctggccgcgccggtgcccgatccgctg
ccgctgttcgacgcgctcaaccggttccggatcctgtgcgcaacccgcagcggcttgcgc
ggcgcggagcacgtcaatgcgctcgtgtccgcgcacgtgcgccacgcggcgcgggtgccg
ctggcggtcggcgcgcactggttcacggggcggccgatcatggtgacgcgcaacgactat
gcgctcgggctcttcaacggcgatatcggcattgcgctgcccgacgcgcacggcgtgctg
cgcgtgtggttcaggcgagcggacggcaccgcgcgcgcggtgtcgccggccgcgctgccg
ccgcacgaaaccgcgttcgcgctgaccgtccacaaatcgcagggctcggaattcgacgaa
gccgtgctcgtgttgccggcgtcgttcggccgcgtgctcacgcgcgaactcgtctatacg
gccgtcacgcgtgcccgcacgcgcgtccaggtgatcgggccgcggcgcgtgctggcgcag
gcggtcgcgacgcgtacacagcgtgattcggggctcgcggcacgcgtcgacgaggcgctt
gcgcggcgccgcagggaggcttcgcgatga
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