Burkholderia contaminans: NL30_19515
Help
Entry
NL30_19515 CDS
T03969
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NL30_19515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcon03021
]
NL30_19515
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_19515
Enzymes [BR:
bcon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NL30_19515
Transcription machinery [BR:
bcon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NL30_19515
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NL30_19515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
DUF6744
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AKM42112
UniProt:
A0A3N8QWX9
LinkDB
All DBs
Position
2:873153..877397
Genome browser
AA seq
1414 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNAKGEGLSFTGVSEVIRAYENK
EVELASRVNVRITEMVHNEDTSEGAPPFVPKISLYATTVGRAILSEILPHGLPFSVLNKP
LKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVTDRDGKETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETVYESGTLLDETAVEEIERLGIDEVRVRTPLTCETRYGLC
AACYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GIVRFTATMRYVTNAKGEQIVISRSGEAMITDDFGRERERHKVPYGATLLQLDGATIKAG
TQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGDEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDAQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMIAEDKRPASYDNVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKES
SDRERFDQIAAEEAFDFGTPSAPAEEPQQHPAAE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagttttcgacgcgatc
aagatcggtctggcctcgcccgacaagatccgttcgtggtcgttcggcgaagtgaagaag
ccggagaccatcaactaccgtacgttcaagccggaacgcgatggtctcttctgcgcgaag
atcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgtctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtcgaagtgacgctggcgaaggtgcgtcgcgaa
cggatgggccacatcgagctggcctcgccggtcgctcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcatacgtggtgatcgaaccgggcatgacgccgctgaaggcgcggcagatcatg
accgaagaggattactacaacaaggtcgaggaatacggcgacgaattccgtgccgaaatg
ggcgcggaaggcgtgcgtgagttgctgcgcgcgatcaacatcgacgagcaggtcgagacg
ctgcgcaccgagctgaagaacaccggctcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtcctcgaggcattccagcgctcgggcatcaagcccgagtggatgattctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctggacggcggccgtttc
gcgacgtcggacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagctgaaggcacctgaaatcatcgtccgcaacgaaaagcggatgctgcag
gaagccgtcgactcgctgctcgacaacggtcgtcgcggcaaggcgatgacgggcgccaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggtaagggcggtcgtttccgtcag
aacctgctgggtaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgcggtctgccgaagctgatggcgctcgagctgttcaagccgttc
atcttcaacaagctggaagtgatgggcgtcgcgacgaccatcaaggctgcgaagaaggaa
gtcgagaaccagacgccggtggtgtgggacattctcgaagaggtgatccgcgagcacccg
gtgatgctgaaccgtgcgccgacgctgcaccgtctcggtatccaggcgttcgagccggtg
ctgatcgaaggcaaggcaatccagctgcacccgctcgtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgtacgctgatgctggcgtcgaacaacgtgctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacccgcgaagcggtcaacgcc
aagggcgaaggcctgtcgttcacgggcgtgtcggaagtgatccgcgcgtacgagaacaag
gaagtcgagctggcatcgcgcgtcaacgtgcggatcaccgaaatggtccacaacgaagac
acgtcggaaggcgcaccgccgttcgtgccgaagatctcgctgtacgcgacgaccgtcggc
cgcgcgatcctgtcggagatcctgccgcacggcctgccgttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaacacggcgttccgcaagtgcggtctgcgt
gcgacggtggtgtttgccgaccagctgatgcagtcgggtttccgtctcgcgacgcgtgcc
ggcatctcgatctgcgtcgacgacatgctcgtgccgccgcagaaggaaacgatcgtcggc
gacgccgcgaagaaggtgaaggagtacgaccgtcagtacatgtcgggtctcgtcaccgcg
caggagcgctacaacaacgtggtcgacatctggtcggcaacgtcggaagcggtcggcaag
gcgatgatggagcagctgtcgacggagccggtgacggatcgcgacggcaaggaaacgcgc
caggaatcgttcaactcgatctacatgatggccgactcgggcgcccggggttcggcggtt
cagattcgtcagctggccggtatgcgtggcctgatggcgaagccggacggctcgattatc
gagacgccgattaccgcgaacttccgcgaaggtctgaacgtgttgcagtacttcatctcg
acccacggtgcacgtaagggtctggctgatacggcactgaagaccgcgaactcgggttac
ctgacgcgtcgtctcgtcgacgtcacgcaggatctggtcgtggtggaggacgattgcggc
acgtcgaacggcgtggcgatgaaggcactcgtcgaaggcggtgaagtcgtcgaagcgctg
cgcgaccgtatcctcggccgcgttgcggttgcggacgtcgtgaacccggaaacgcaggaa
acggtgtacgaatcgggcacgctgctcgacgaaacggcggtcgaggaaatcgaacgcctc
ggcatcgacgaagtgcgcgtgcgcacgccgctgacctgcgaaacgcgctacggcctgtgc
gcagcctgctacggccgtgacctcggccgcggctcgctcgtaaacgtcggcgaagcagtc
ggcgtgatcgcggcacagtcgatcggtgaaccgggcacgcagctgacgatgcgtacgttc
cacatcggtggtgcggcatcgcgtgcggcagtggcttcgtcggtcgaagcgaagagcaac
ggtatcgtccgcttcacggcgacgatgcgctacgtcacgaacgcgaagggcgagcagatc
gtcatttcccgttcgggcgaagcgatgatcaccgacgatttcggtcgcgagcgcgagcgt
cacaaagtgccgtacggcgcgacgctgctgcagctcgacggcgcgacgatcaaggcaggc
acgcagctcgccacgtgggatccgctgacgcgtccgatcatcaccgagtacggtggtacg
gtgaagttcgagaacgtcgaggaaggcgtgaccgtcgcgaagcagatcgacgacgtgacc
ggcctgtcgacgctggtcgtgatcgacgtgaagcgtcgtggctcgcaagcttcgaagagc
gtgcgtccgcaggtcaagctgctcgacgcgaacggcgacgaagtgaagattccgggcacg
gagcacgcggtgcagatcggcttccaggtcggcgcactgatcaccgtgaaggatggtcag
caggtgcaggtcggtgaagtgctcgcacgtatcccgacggaagcgcagaagacgcgtgac
attaccggcggtctgccgcgggtggcggaactgttcgaagcgcgttcgccgaaggatgcc
ggcattctcgcggaagtcaccggtacgacgtcgttcggtaaggacacgaagggcaagcag
cgtctcgtcatcacggacctcgagggcaatcagcacgagttcctgatcgcgaaggaaaag
caggttctggttcacgatgcccaggtcgtcaacaagggcgaaatgatcgtggacggtccg
gccgatccgcacgacatcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtc
gacgaagtgcaggacgtgtatcgtctgcagggcgtgaagatcaacgacaagcacatcgag
gtgatcgttcgccagatgctgcgtcgtgtgcagatcaccgacaacggtgatacgcgcttc
atcccgggcgaacaggtcgagcgttccgacatgctggacgagaacgatcgcatgatcgcc
gaggacaagcgtccggcttcgtacgacaacgtgctgctcggtatcacgaaggcatcgctg
tcgaccgactcgttcatctccgcggcatcgttccaggaaacgacccgcgtgctgaccgaa
gcggcgatcatgggcaagcgcgacgatttgcgtggcctgaaggaaaacgtgatcgtcggc
cgtctgattccggccggtacgggtctcgcgttccacaaggcacgcaaggcgaaggaatcg
tcggatcgcgagcgtttcgaccagatcgcagcggaagaggcattcgacttcggcacgccg
agcgcgccggcagaagagccgcagcaacacccggcagccgagtaa
DBGET
integrated database retrieval system
