Bacillus cereus AH820: BCAH820_5548
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Entry
BCAH820_5548 CDS
T00814
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
bcu
Bacillus cereus AH820
Pathway
bcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCAH820_5548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcu03019
]
BCAH820_5548
03009 Ribosome biogenesis [BR:
bcu03009
]
BCAH820_5548
Messenger RNA biogenesis [BR:
bcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCAH820_5548
Ribosome biogenesis [BR:
bcu03009
]
Prokaryotic type
rRNA helicases
BCAH820_5548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACK89155
UniProt:
B7JIG9
LinkDB
All DBs
Position
complement(5255712..5257157)
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AA seq
481 aa
AA seq
DB search
MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI
PLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELK
QKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT
MLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIE
NPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATD
VAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAY
IGFAIPKANAPSKEEVMKGKAAFEEKIQAKPTIKKDKSADINKGIMKLYFNGGKKKKIRA
VDFVGTIAKIQGVSAEDIGIITIQDNVSYVEILNGKGPLVLKVMRNTTIKGKQLKVHEAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaagttttagtaattatgcattaagtaaagaagtaagacgagcacttact
ggtttaggatatgagcatccaacagaagtacaaggagaggttattccagttgcattacaa
aagaaggatcttgttgtaaagtcgcaaacaggaagtggaaaaacggcttcgttcggtata
ccactttgtgaaatggtagagtgggaagagaataaaccacaagcgttagttttaacacca
acgagagaacttgctgttcaagtaaaagaagatattacaaatatagggcgattcaaaaga
attaaagctgctgcaatttatggtaaatctccatttgcacgtcaaaaattagagttaaag
caaaagacgcatattgtagtaggaactccaggacgtgtgctagatcatattgaaaaaggg
actctttcattagaacgattaaaatatttagtgattgatgaagcagatgaaatgctaaac
atgggctttatcgaccaagtagaggcaattattgatgaattacctacaaaaagaatgaca
atgctattttcagcaaccttaccggaagatgttgaaaggttatcccgtacgtatatgaac
gcaccaactcatattgaaattaaagctgctgggattacaacagataaaattgaacatacc
ctttttgaagtgagggaagaagagaagttgtcacttcttaaagatgtaacaacaattgaa
aatccagacagttgcattattttttgtcgtacacaagaaaacgtagatcatgtatataga
cagctagatcgagttaattacccttgcgataaaatacatggtggcatggtgcaagaagat
cgttttggggtgatggatgattttagaaaaggaaagttccgttatttagtagcaacggat
gtagctgcgagaggaattgatattgataatattacacatgttattaattatgatattcca
ttagagaaagaaagttatgtacaccgtacaggcagaacaggacgagctggtaatagcgga
aaggccatcacatttataacgccttatgaagatcgatttttagaagagattgaggcgtac
atcggttttgcaattccgaaggcaaacgccccttcaaaagaagaagttatgaaaggtaaa
gctgcatttgaagaaaaaatacaagctaaaccaactataaagaaggataaaagtgcagat
ataaataaaggaattatgaaattgtactttaatggcggaaagaaaaagaaaattagagcg
gtggattttgtcggtacaattgctaaaattcaaggtgtttcagctgaagatataggcatt
attacaatacaagataatgtttcgtatgttgaaatattaaatggaaaagggccacttgtt
ttaaaggttatgagaaatacaacgataaaaggtaaacaattgaaagttcatgaggcaaat
aagtaa
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