Beutenbergia cavernae: Bcav_0418
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Entry
Bcav_0418 CDS
T00893
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bcv
Beutenbergia cavernae
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcv03021
]
Bcav_0418
Transcription machinery [BR:
bcv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bcav_0418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
DUF4440
Motif
Other DBs
NCBI-ProteinID:
ACQ78681
UniProt:
C5BX06
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Position
complement(468672..469670)
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AA seq
332 aa
AA seq
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MTTENGPDQGRREPNHSTVMGERRHLLNLAYRLLGTLAEAEDVVQETYARWYAQSPQERD
AIRSPGAWLTTVAGRICLDVLGSARARRERYVGEWVPEPLPAAGQWSSVGRPAGLGDPAD
RITLDESVTMAFLVTLEAMSPAERVALILHDVFGYSFPEVANIVGRTPAACRQLASSARR
RARAYESPETSTIRHAETVRAFKRAWVAQDIEALLELLDPDATAIADGGGLAHAALDPIE
GADQVAHHYVSIAERTPANVTIVECLVNGQPGLSVQREGAIVTVLAFDITGDRIQHIWAV
LNPAKLQRWNDDADRRPTAGSVPPSTPRASDR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagaacgggccggaccagggccggcgggaaccgaaccacagcaccgtgatg
ggtgagcgccgtcatctgctcaacctcgcgtaccggctcctgggcacgctggccgaggcg
gaggacgtcgtgcaggagacgtacgcacgctggtacgcccagtcgccacaggagcgtgac
gccatccgctcccccggagcgtggctgacgaccgtggcgggccgcatctgcctcgacgtc
ctcggttcggcgcgggcccgcagagagcggtatgtcggggagtgggttcccgagccgctg
cccgcggccggccagtggtccagcgtcggccggcctgccggcctcggcgaccccgcggac
cggatcaccctcgacgagtccgtgaccatggccttcctggtgacgctggaggccatgagc
ccggccgaacgcgtcgcgctgatcctccacgacgtcttcggctactcgttccccgaggtc
gcgaacatcgtgggacgaacgccggcggcctgccggcagctcgcctcctcggctcgccgc
cgtgcccgtgcgtacgagtcccctgagacgtcgaccatccggcacgcggagacggtccga
gcattcaagagggcatgggtggcccaggacatcgaggcgctcctcgagcttctcgatccc
gacgcgacagcgatcgccgacggcggcgggcttgcccacgcggcgctcgatcccatcgag
ggcgccgaccaggtcgcgcaccactacgtgtcgatcgccgagcgaacgcccgcgaacgtg
accatcgtcgagtgcctggtcaacggtcagcccggcttgtcggtgcagcgggagggcgcc
atcgtcaccgtgctggcgttcgacatcaccggtgaccgcatccagcacatctgggccgtg
ctcaaccccgccaagctccaacgctggaacgacgacgccgatcggcggccgaccgccggg
agcgtgcctccgtcgacgccgcgcgccagcgatcgatga
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