Bacillus cytotoxicus: Bcer98_1792
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Entry
Bcer98_1792 CDS
T00560
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bcy
Bacillus cytotoxicus
Pathway
bcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcer98_1792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcy03019
]
Bcer98_1792
03009 Ribosome biogenesis [BR:
bcy03009
]
Bcer98_1792
Enzymes [BR:
bcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bcer98_1792
Messenger RNA biogenesis [BR:
bcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bcer98_1792
Ribosome biogenesis [BR:
bcy03009
]
Prokaryotic type
rRNA helicases
Bcer98_1792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABS22091
UniProt:
A7GPN3
LinkDB
All DBs
Position
1910192..1911496
Genome browser
AA seq
434 aa
AA seq
DB search
MIDLKKFLELGMSETFQHTLRENGIAEATPIQEKAIPVIMDGKDVIGQAKTGTGKTLAFV
LPILENIDPNASDIQALIVAPTRELALQITTEIKKMLVHKQDIHVLAIYGGQDVEQQMKK
LKGNTHIVVATPGRLLDHLRRETIVLSNVSMVVLDEADQMLHFGFLYDIEHILEETPENK
QTMLFSATMPKDIKKLAKRYMKEPQVIQIQSAEVTVENIKQRVIETTDRAKQDALRYVME
RDQPFLAVIFCRTKRRVTKLFTALKGYGYNCDELHGDLSQAKRERVMKNFREAKIQYLIA
TDVAARGLDVEGVTHVFNYDIPEDVESYIHRIGRTGRAGGTGLAITFVAPKDKMYLKEIE
KYIGSTLQRQEIEQPAKQTNNTNDKKKQIKKPQKAGQYRLKGKQDGMKKTNQSSSYKVKQ
KKRGTKQGQKRRSR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatttgaaaaaatttttagaacttggaatgagtgaaacatttcaacatacatta
cgagaaaatggaattgctgaagcaacacccattcaggaaaaggcaattcctgttattatg
gatgggaaagatgtaattggacaagcaaaaacagggacaggaaaaacgcttgcattcgtt
ttaccgattttagagaatattgatccaaatgcaagtgatatacaagctttaatcgtagcg
ccaacgagagaactagcattacaaattacaactgaaattaaaaaaatgctggtccataaa
caggatattcatgttttggcgatatatggtggacaagatgtggaacagcaaatgaaaaaa
ttaaaaggaaatacgcatattgttgtagcaacaccggggcgtttgttagatcatttacgc
cgcgagacaattgtgttatcaaacgtttctatggtggtattagatgaagcggatcaaatg
ctgcattttggtttcttatatgatattgaacatattttagaagaaacacctgagaataaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaacttgcgaagcgatat
atgaaagagccacaggtgattcaaatccaaagtgcagaagtcactgtagaaaatataaag
cagcgtgtaattgaaacgacagatcgcgcaaaacaagacgcacttcgttatgtcatggag
cgtgaccagccatttctagctgttattttttgccggacaaagcgccgcgtaacgaaatta
tttactgctttaaaagggtacggttacaattgtgatgaattgcatggagatttatcgcag
gcgaaacgtgaaagagtaatgaaaaacttccgcgaagcaaaaattcaatatttaattgca
acagatgttgcggctcgtggattagatgtagaaggcgtaacgcacgtatttaactatgat
attccagaagatgtagagagctatatacaccgaattggtcgaacaggtcgtgctggagga
accggtcttgcgattacatttgtcgctccgaaagataagatgtatttaaaagaaatcgaa
aagtatatcggtagtactttacaaagacaagaaattgaacaacctgctaagcaaacaaat
aatacaaatgacaaaaagaaacagatcaaaaagccacagaaagcaggacaatatcgttta
aaaggtaaacaagacgggatgaaaaaaacaaatcaaagttcttcttataaagtaaagcaa
aagaagagaggaacaaagcaaggacaaaaaagacgcagtcgttaa
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