Bacillus cytotoxicus: Bcer98_3288
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Entry
Bcer98_3288 CDS
T00560
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcy
Bacillus cytotoxicus
Pathway
bcy03030
DNA replication
bcy03430
Mismatch repair
bcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcer98_3288
03430 Mismatch repair
Bcer98_3288
03440 Homologous recombination
Bcer98_3288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcy03032
]
Bcer98_3288
03400 DNA repair and recombination proteins [BR:
bcy03400
]
Bcer98_3288
Enzymes [BR:
bcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcer98_3288
DNA replication proteins [BR:
bcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcer98_3288
DNA repair and recombination proteins [BR:
bcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcer98_3288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ABS23507
UniProt:
A7GTP9
LinkDB
All DBs
Position
complement(3358597..3361926)
Genome browser
AA seq
1109 aa
AA seq
DB search
MKFVHLQCQTVYSLLKSACKIDELVARAKELGFSALAITDENVMYGVIPFYKACKKMGIK
PIIGLTASVFNEEEERAYPLVLLAENEVGYQNLLKISSTIMTKSKDGIPKKWLVHYAKGL
TAISPGKDGEIEQLLLQGKDERAEEVARTYQNMFGHFYMSVQHHAIQDELLLQEKIEEFV
RNMNIPIVATNDVRYINQNDALVQECLLSVQSGTKMTDPDRPRLKTDQYYLKSSAEMEAL
FSHVEEALRNTIHIAERCHVEIPFHVNQLPKFPVPTNETSDAYLRRMCEEGLYKRYGTPK
EVHVNRLYHELEVISRMGFSDYFLIVWDFMKYAHENRILTGPGRGSAAGSLVAYVLEITD
IDPIAYNLLFERFLNPERVTLPDIDIDFPDVRRDEMIRYVKDKYGQLRVAQIVTFGTLAA
KAAIRDIARVMGLPPRDIDLFSKLIPSKLGITLKEAYEESEALRDFIQGNLLYERVFEIA
KRVEGLPRHTSIHAAGVIMSQEPLTKSIAIQEGHNDVYVTQYPADVLEELGLLKMDFLGL
RNLTLLENILTFITTTTGKQIDIRNVSLQDEKTFQLLGRGDTTGVFQLESGGMRNVLRGL
KPNEFEDIVVVNSLYRPGPMEQIPVFIESKHGRRNIQYLHPDLKPILESTYGVIVYQEQI
MQIASKLAGFSLGEADLLRRAVSKKSRDILEEERKHFVQGCLQNGYDQTSAEQIYDLIVR
FANYGFNRSHAVAYSMIGYQLAYLKANYPLQFMTALLSSAIGNEDKITQYIRETKRKGFC
VLPPSLHRSGYHFQIEGNAIRYSLLSIRNIGMATVTALIEEREKAPFQDLFEFCLRMPVK
FVTERNLEAFVWSGCFDDFQVSRTTLFNSIKGALEYASLARELGEESVPKSVYVQGKELS
FIEQLNKEKETLGFYLSSYPTAQYASLVKELEIPSLAQAMRQKGKVQRAIVYITRVKIIR
TKKMQKMAFVTFCDQNDEMEAVVFPETYIHFSERLQEGEIVLVEGTVESRNNKLQWIING
LYSLEQMDVYNEMKEASIYVKLPSQYDKKLFNQVTKILFHYSGFAKVLIYYEKEHKVVQL
SRSLSIHPSEECLRTLREIVGKENVVVKI
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttgtgcatttacaatgtcaaaccgtttatagtttgttaaaaagtgcttgtaaa
attgatgaacttgtggctagagcgaaagaacttgggttttcagctcttgcaattacagat
gaaaacgtgatgtacggagttattccattttataaagcatgtaagaagatggggataaag
ccgattatcggattaacagcttccgtttttaatgaggaagaagaacgcgcttatccactt
gttttattggctgaaaatgaagtaggttatcaaaatctattgaaaatttctagcaccatt
atgacaaagtctaaagatggaattccaaaaaagtggcttgtccattatgcgaaaggatta
accgcaatttcaccagggaaagatggagaaattgaacaattattattgcaaggaaaagat
gagcgtgcagaagaagttgcccgcacgtaccaaaatatgtttggccatttttatatgagt
gtgcagcatcatgcaattcaagatgaattattgttgcaagaaaaaatagaagagtttgtc
agaaatatgaacattccaatcgtggcaacaaatgatgttcgttatattaatcaaaacgat
gcacttgtgcaagaatgtttattatctgtccagagcggtacaaagatgacggatccggat
aggccaaggttgaaaacggatcagtactatttgaaatcatccgctgaaatggaagcctta
ttttctcatgtggaagaagcacttcgtaataccattcatattgcagaacgttgccatgta
gaaattccatttcatgtgaatcaattaccgaaatttcctgttcctactaatgaaacgagc
gatgcttatttgcgccgaatgtgcgaagaggggctatataaacgctatggaacgccaaaa
gaggtacatgtgaaccgtttatatcatgaacttgaagttatctctcgcatggggttcagt
gattatttcctcatcgtatgggactttatgaaatatgcacacgagaataggattttaaca
gggccaggacgtggatcggcagcgggttcacttgtcgcatatgtactagagattacagat
attgacccaattgcatacaatttattatttgaaagatttttaaatccagaacgtgttaca
cttccggatattgatattgattttcctgatgtaagacgcgatgaaatgattcgttatgta
aaggataaatacggccagcttcgtgttgctcaaattgttacgttcggaacactggctgca
aaagcagcaatccgtgatattgctcgtgtaatgggattgccgcctcgagatattgatttg
ttctctaaactgattccatcgaaacttgggattacattgaaagaagcttatgaggagtca
gaagcacttcgtgattttattcaaggaaatcttttgtatgaacgtgtgtttgaaattgca
aaacgtgtggaaggattaccgcgtcatacgtctatccatgcagctggcgttattatgagt
caagagcccctaacaaaaagtattgcgattcaagaggggcataatgacgtatatgtaacg
caatatccagcggatgttttagaagaacttggactactaaagatggactttttagggttg
cgcaatttaacattgcttgaaaatattcttacttttattacaacaacgactggaaaacaa
attgatataaggaatgtatcgctccaagatgaaaagacatttcaattgctcggaagagga
gatacaacaggggtatttcagcttgaatcaggtggaatgcgaaatgtacttcgcgggtta
aagccaaatgaatttgaagatatcgttgtcgtcaactctttatatcgcccaggaccgatg
gaacaaattccagtctttattgaatctaaacatggaagacgaaacattcaatatttacat
ccagatttgaaaccgattttagagagtacatatggtgtaattgtttatcaagaacaaatt
atgcaaattgcttctaaattagctggattttcacttggagaagcggatttacttcgccgt
gcagtcagtaaaaaaagtcgagatattttagaggaagagcgaaagcattttgtgcaaggt
tgtttacaaaatggatatgatcaaacatctgcagagcaaatttacgatttaattgttaga
tttgcaaattacggttttaaccgaagccatgcggtggcctacagtatgattgggtatcaa
cttgcatatttaaaagcgaattatccacttcagtttatgaccgctctattatccagtgca
attggaaatgaagataagattacgcaatatatacgcgaaacaaaacgcaaaggtttctgt
gttttgccgccatcacttcatagaagtggctatcattttcaaattgaagggaatgcgatt
cgttatagccttctttccattcgaaatattgggatggcaacagtgactgctttgattgaa
gaaagagagaaagcgccgtttcaagatttatttgagttttgtcttcgaatgccagtgaaa
tttgtaacagagcgcaatttagaggcgtttgtttggtctggttgtttcgatgattttcaa
gtttcacgaacaactttgtttaacagcataaagggtgctctagaatacgcaagtcttgcg
cgtgaattaggagaagaaagtgtaccaaaatcagtttacgtgcaagggaaagagttgtct
tttatcgaacaattgaataaggaaaaagaaacgcttggtttttatttatcaagttatccg
acagctcagtatgcaagtttagtaaaagaattagaaatcccttctcttgcgcaagcaatg
agacaaaaaggaaaagtacaacgcgcgattgtttacattacaagagtgaaaataattcgc
acaaaaaaaatgcaaaaaatggcatttgttacgttttgtgatcagaatgatgaaatggaa
gcggttgtttttccagagacatacattcatttttcagaaaggttacaagaaggagaaatt
gttcttgttgagggaacggtagaatctagaaataataaattacagtggattataaatggg
ctgtattcattagaacaaatggatgtatataacgaaatgaaagaagcatccatttatgtc
aaattaccttcgcagtacgataagaagttattcaatcaagttacaaaaatattatttcac
tattcaggttttgcgaaagtactaatttattatgaaaaggaacataaagtggtacaatta
tctcgtagtttgtcaatccatccgagcgaggaatgtttaagaacacttcgtgaaattgtc
ggcaaagaaaatgtggtcgtaaaaatataa
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integrated database retrieval system
