Brachypodium distachyon (stiff brome): 100822879
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Entry
100822879 CDS
T01717
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100822879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100822879
Spliceosome [BR:
bdi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
100822879
Complex B
100822879
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
100822879
NCBI-ProteinID:
XP_003574171
UniProt:
I1I596
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Position
3:complement(32305959..32315128)
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AA seq
478 aa
AA seq
DB search
MGDYGNAMMRNQDAGVQSRTKAQSRANLLQLKLIGQSHPTGLTTNLLKLFEPRPPLEHKP
PVEKRKLPAYTGMAQFVSRFAEPGDTEYAPPVPTCETRAEKKDRIRQLKLEQGAAKVAEE
LQKYDPQNDPNVTGDPYKTLFVARLNYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRG
YAFVEYVHTRDMKSAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGED
ASQKHSAREQQNAAGRPRSEEPRRDDRPADRDREKSRERVRERDRDERTRERSHDRTRDR
DPREEKHHHRDRERTRDRDRERDQERDRGRDRRDRDRHKDHGRDRDQDRDRKRERSHGRG
RDRDRDYEHVSHEQDPARDRDRDYKRARHEHDRGHFQESDADYGNGDPSYNQHRSHEQYG
YSQGHGHETERSKRDNSHSKMANNYLGQPNDAEPEVPEEGEAYEEGDYQHNRPDEYRN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactacggcaacgcgatgatgcggaaccaggacgccggtgtgcagtcccgcacg
aaggcgcagagccgtgccaacctcctccagctcaagctcatcggtcagagccatccgacg
gggctcacgaccaacctgctgaagctgttcgagccacggccgccgctcgagcacaagcca
cccgtcgagaagcgcaaattgccagcttatacggggatggcgcagtttgtgtcacggttt
gcggagccaggtgacaccgagtatgctccacctgtccccacatgcgagactagggctgaa
aagaaggatagaattcgccaacttaagcttgagcaaggtgcagctaaggttgctgaagag
cttcagaagtatgacccgcaaaatgaccccaatgtcactggagatccgtacaaaacactc
tttgttgcaagacttaactacgaaacatccgagcagaaggttaaaagggactttgaagct
tatggacctattaaaagggttcggcttgtaactgacaaggtaacaaataaacctagagga
tatgcattcgtagagtatgtgcacactcgggacatgaaaagtgcttacaagcaagctgat
gggcgaaaagtggacaacaagagggtgctggttgacgtggaacgtggtagaactgttcca
aattggcgtcccaggagattgggtggtggacttggatcaagcaggattggtggtgaagat
gcctcccagaagcattctgctagagagcagcagaatgctgctgggcgccctagatcagaa
gagcctaggagggatgatcgtcctgcagatcgggatcgtgagaaatcgcgtgaaagagtg
cgggaaagagatcgtgatgagagaacccgtgaacgctcccatgacaggactcgtgatcgt
gatccaagggaagagaagcaccaccatagagatcgtgagaggactcgggacagggatcga
gaacgggaccaggagagagaccgcgggcgtgaccgccgtgatagagataggcacaaggat
catggtcgggaccgagaccaggatagggacaggaaacgtgagcgttctcatggcaggggc
agggatcgtgacagagattacgagcatgtgagccatgagcaggaccctgccagggaccga
gaccgagattacaagcgtgcacgccatgaacatgaccgtggtcactttcaggagagtgat
gctgattatggcaatggtgaccccagctataaccagcacagaagccatgagcagtatggt
tatagccaaggacatgggcatgagactgagcgctcaaagcgtgataattcgcacagtaag
atggcaaacaattatctgggacagcctaacgatgcagaacctgaagtccctgaggaaggc
gaggcatatgaggaaggtgactaccagcataaccggccagatgaatacaggaactga
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