Brachypodium distachyon (stiff brome): 100828093
Help
Entry
100828093 CDS
T01717
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1 isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
3.6.4.13
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100828093
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Helicases
100828093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
TOP_N
Motif
Other DBs
NCBI-GeneID:
100828093
NCBI-ProteinID:
XP_003570297
UniProt:
I1IDG2
LinkDB
All DBs
Position
3:complement(54378725..54383757)
Genome browser
AA seq
522 aa
AA seq
DB search
MVATEKKEQEKDEGPSSRVPHLPWMRYPVDIDGFSGCPVARLPRLDPRLAEAVQRMGIES
FFSVQVATWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPT
RDLALQVKEVFDAIAPVVGLSVASAVGQSSIADEISDLIKKSKQELYATLDEEYVEMEPQ
TKVDILVATPGRLMDHINMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQFTRSTNQ
NHPWRDTAGQTLLHPLTTNRRSGVERGFKGKCYPRLAKIVCSATLTQDPSKLSQLELHHP
LLLNSGKKRYRIPTKLESYKLICTTNLKPLCLIVLLQELHGEKCLVFTSSVESSHRLSTL
LGFFEDLPFKFSEFSRLQRESTRRKTLADFKEGKIDVLIGTDIMARGIHIDGLKYVINYD
MPPYVKTYIHRAGRTARAGESGSCFTLLRKHEVKTFDKMLKKADDSSCSLRSLPDESIET
FRPVFSSALKKLEESLEPEASKKSKSGDKIPKSSKRKRTIQT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggttgccacggagaagaaggagcaggagaaggatgaggggccctcgagccgcgtgccg
cacctgccgtggatgcggtaccccgtcgacatcgatggcttctccggctgccccgtcgcg
cgcctcccccgcctcgaccccagattggcagaggcagtgcagagaatgggaatcgaatca
ttcttctctgttcaggtcgcaacatggctagaaacaattggccctggtgcttttgagagg
gatatctgtatcaattccccaactggatcgggtaaaactctcgcttatgccttgcctatt
gtgcaaatgctctccactcggaaagtaaggtgcttgcgtgctttggttgtgctgcctaca
cgggatttagcattgcaggttaaagaggtctttgatgctattgctcctgtggtgggctta
tcagtagcttcagcagttggtcaatcatccatagcagatgaaatctctgatcttatcaag
aagtccaaacaagagctttacgcaactcttgacgaagaatatgtcgaaatggaaccacag
actaaagttgatattttggtggcaactcctggaaggttgatggatcatattaacatgaca
aaaggttttagtctggagcatcttcaatacctggttgttgatgagacggataggatgtta
agagaggcatatcaatcctggttgccaacagttatccagtttactcgctcgactaatcaa
aatcacccctggcgtgacactgccgggcaaactctattacatccattgactaccaatcga
agatcgggtgtcgagcgagggtttaaaggtaaatgctatccaagactggcaaagattgtt
tgttctgctacactgactcaagatcctagcaaactttctcagcttgagttgcatcatccc
ttattgttgaatagtgggaagaagcgttacagaattcctacaaaactggagtcctacaag
ctgatctgcacaacaaacttaaaaccactgtgtctcattgttcttctccaagagctgcat
ggggagaagtgcttggttttcacttcatcggtagaatcaagtcacagactaagtactttg
ctgggatttttcgaagacttaccctttaagtttagtgaattttcacgtttgcagcgggaa
tctactcgaaggaagacacttgcagatttcaaggaaggcaaaatagatgttctaattggt
actgatataatggctcgagggatacatattgatggcttgaaatatgttatcaactatgat
atgccgccgtacgtgaaaacatacatccaccgagcaggtcgaactgctagggcaggtgaa
tctggttcttgtttcacgcttttaaggaaacacgaggttaaaacttttgacaaaatgcta
aaaaaggcagacgattctagctgcagtctgcgctcactacccgacgaatcaattgaaacc
tttcgcccagttttttccagtgctctaaagaaattggaagaatctctggaaccagaagca
tcaaagaaatctaagtcaggagataaaataccaaagtcttctaaaagaaagagaaccatc
cagacgtga
DBGET
integrated database retrieval system
