Brachypodium distachyon (stiff brome): 100828636
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Entry
100828636 CDS
T01717
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100828636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100828636
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100828636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
100828636
NCBI-ProteinID:
XP_003577593
UniProt:
I1ILU9
LinkDB
All DBs
Position
4:22281454..22290511
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AA seq
787 aa
AA seq
DB search
MAADPSAASAAADPDGPDAVRLTWNAWPRSKVEASRCVVPLAAAISPVRCPESLASPPLP
YAPLRCKPPCSALLNPFARVDYAAKIWICPLCFSRNHFPPHYAGISESNVPAELFPQCST
VEYLVAGAPGGPAPGSPGPPPPVFLFVIDTCVIEEELEYVKMSMRKAVALLPEHALVGLV
TFGTQVHLHELGFSDLSKIYVFRGTKEISKDQILDQLGLAGAGRPGFPKMPQQPGVQQVN
GMHPSATAGVNRFLLPVSECECTLSTLLDELQPDQWPVETGHRAIRCTGVALSVAAGLLG
ACMPGTGARIIALLGGPCTEGPGVIVSKDLSEPVRSHKDLDKDAAPHFQKAVKFYDGLAK
QLVSQGHVLDVFASALDQVGLAEMKLAIERTGGLVVLSESFGHSVFKDSFKRIFEGGEQS
LGLSFNGTLEINCSKDIKVQGVIGPCTSLEKKGALCADTVVGQGNTTAWKMCGLDRNTSL
TVFFDVSPSERSSQPGQQNPNLYIQFVTSYQHPEGQMRIRVTTISRKWVDGSTNTEELVE
GFDQETAAVVLARYISLKMEIEEEFDATRWLDRSLIRLCSRFGDYRKDDPSSFSLHSNFS
LFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRESITNSVAMIQPSLISFSFDSPPSPV
FLDVASIAADRILLLDAYFSVVIFHGMTIAQWRNMCYQNQPEHQQFAQLLQAPQDEAQVI
ISGRFPVPRLVVCDQHGSQARFLLAKLNPSATYNSAHDVAPGSDIIFTDDVSFQVFCEHL
QRLAVQS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacccctccgcggcctcggcggccgccgaccccgacggcccggacgccgtc
cgcctcacgtggaacgcctggccgcggtccaaggtcgaggccagccgctgcgttgtcccg
ctcgccgccgccatctcgccggtccgctgccccgagtccctcgcctcgccgccgctgccc
tacgcgccgctcagatgcaagccgccctgttccgcgctcctcaaccccttcgcccgtgtc
gactacgccgccaagatctggatctgcccgctctgcttttcccggaaccacttccccccg
cactacgccggcatctccgagagcaacgtccccgccgagctcttcccgcagtgctccacc
gtcgagtacctcgtcgccggcgccccgggcgggcccgccccgggatcgccggggccgccg
ccgccggtgttcttattcgtgatcgacacgtgcgtcatcgaggaggaactggagtacgtc
aagatgtccatgcggaaggcagtcgcgctcctgcccgagcacgccctcgtcggcctggtc
accttcgggacgcaggtgcatctccacgagcttgggttctccgaccttagcaagatctat
gtgttccgggggaccaaggagatctccaaagatcagattttggatcagcttgggttagca
ggtgcgggtcggccggggttcccaaagatgccacagcaaccgggcgtgcaacaggtcaat
gggatgcatccatcagcaacggccggggttaacaggttcttgctaccggtgtcagagtgc
gaatgcacactcagcacgttgctggacgagttgcagcctgaccagtggccggtggaaact
gggcaccgtgcaatccggtgcaccggtgttgcgttgagcgtagctgctggcttgcttggg
gcttgcatgcctgggacgggcgcaaggattattgcgctacttggtgggccatgtactgaa
ggtcctggagtgatcgtgtcgaaagatttatcggagccagttagatcacataaggatctc
gataaggatgcagctcctcatttccagaaagctgtcaaattttacgatggccttgccaag
caattggtcagtcaaggtcatgttctagatgtttttgcatctgctcttgatcaggttgga
ctagcggagatgaagcttgctattgagagaacaggtggccttgttgtcttatctgaaagt
tttgggcattcggtatttaaggattcttttaaacgtatttttgagggaggtgaacagtct
ttaggcctctcattcaatggcacacttgaaataaactgttcgaaggacattaaagttcaa
ggtgttattggaccgtgcacatctttggagaagaaaggagctctgtgcgcagacacagtt
gttggccaaggaaacacaacggcatggaaaatgtgtggtcttgatagaaatacttcatta
acagtattttttgatgtctcaccaagtgaacgctccagccaaccaggacaacaaaatccc
aatttgtatatacaattcgtaaccagttaccaacacccagaaggtcaaatgaggataaga
gttactactataagcagaaaatgggtggatggttctaccaatactgaggaactagtcgaa
ggatttgaccaggaaactgcagctgttgtgttagcaagatatatctccctgaaaatggaa
atagaggaagagtttgacgcaacacggtggctcgatagatctctcatacggctttgttca
agatttggggattatcggaaggatgacccctcttcatttagcctacattctaatttctca
ctatttcctcaatttatgtttaatctgcggcgttcacaatttgttcaggttttcaataac
agtccagacgaaacagcttatttccggatgttactcaaccgagagagtatcactaattcg
gtcgccatgattcagccgtcattaatttcattttcgtttgattcacctccttctcctgta
ttcctcgatgtggcatcaatagcagcagatcgtatacttctacttgatgcatacttcagt
gttgtcatcttccatggcatgacaatcgctcagtggagaaacatgtgctaccagaaccaa
ccggaacatcagcaatttgcacaattgttacaagcgcctcaggatgaggctcaggtcata
ataagcggtcgatttccagttcctagactagttgtgtgtgaccaacatggctcgcaggca
aggttcttgttagcgaaactgaatccttcggccacatataattcagcacatgatgttgca
ccaggttctgacatcatattcaccgatgatgttagcttccaggtcttttgtgagcatctt
caaaggcttgctgttcagtcgtaa
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