Brachypodium distachyon (stiff brome): 100836909
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Entry
100836909 CDS
T01717
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4 isoform X1
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100836909
Enzymes [BR:
bdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
100836909
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100836909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_1
Kelch_6
Kelch_4
Kelch_3
Kelch_2
Kelch_5
MTS
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
100836909
NCBI-ProteinID:
XP_010237764
UniProt:
I1GU05
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Position
1:complement(21387477..21395767)
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AA seq
1088 aa
AA seq
DB search
MDFSRRKAAALAALSSPAPDKSPKGGVDAPIAPLLDAINSHADLFTTSSCSGRISVLAQP
SPQPHPGEPKPKKKARGGGWVYISHDPADPDAVVELLFGGKAVGERGGGEELVLRFEPMI
VAVECRDAAAAAALVAVAVGAGFRESGITSLQRRAMVAIRSSIRMEVPIGLIDGLVVSPE
YIRYLVRIANCKMESNKKRMDGFLDVLQSKGLPGISGLLDGCNKTDSCCLGSKVKLSHNR
TVQTHNEVLVAEKRSNDYSCEAGEKGDGEICEKSIEGSYFENRDPPRDNGAKYGFGNAER
LMHEGKLSALSRNKCCHLSITDLKISGEPIEKLFLWGQSACAVNVGGEQRVVTFGGFGGP
GRHARRNYSLLLDQKSGLLTEINVKESPSPRMGHTVAVIDNHIYAIGGRAGPSEILEDVW
VFQSTENRWSRVECTGNIFRPRHRHAAAAAALKIYVFGGLSNEGMYSCMNILDTENMQWN
VIAAASEWPCARHSHSLVSYGSKLYMFGGHDGQRALNDFYSFDITTLRWNKESTSGRTPS
PRFSHCMFIYKHYLGILGGCPIRENNQEVALLSLEHRVWFHVSIPSLGQCLCVRSSAVVT
DDDLVVVGGGASCYAFGTKFSQPVKIDLHLLDSVFELVYKKNDMVIESFDQISTTNLQEH
EQNGTFVSHDVKSLVDTAASDFSDSDPLVLQMEKKYAKLAKDILKKFGWLDLARKVRVSQ
DNVHVLFPVSRIFHTLIIDHHSKMLDDDSCISEGVSECPEKKVLNASTSLHKALEILSSC
HGSLLKDELALGRKAFKSPQTIMRELVSSLLEREGMPSQLLQQLPTRWETLGDITVLPKT
CFKDPQWESIKEELWQLVAKLLGAQRLARQGKIMPNGTRDSTLELLVGDNGWVTHFENGI
SYSLDATKCMFSSGNRSEKLRMGQLDCSDEVVVDLFSGIGYFVLPFLVKANAKLVYACEW
NPHALEALHRNVRDNRVADRCVILEGDNRVIAPKGVADRVCLGLIPSSECSWATAVKALR
VEGGMLHIHGNVNDSDEASWLDSVVESISNTATTHGLSWKVSLEHVERVKWYGPHIQHVV
VDVRCQAN
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacttctctcgccggaaagcggcggcgctggccgcgctctcctcgccggcgccggac
aagtcccctaaaggcggggtagacgcccccatcgccccacttctcgacgccatcaactcc
catgcggatctcttcaccacctcctcctgctccggccgcatctcagtcctcgcacagccc
tcgccgcagcctcaccctggtgaacccaagcccaagaagaaggcccgtggcggcgggtgg
gtgtacatctcgcatgaccccgccgacccggatgccgttgtggagttgctcttcggtggg
aaggctgtcggggagaggggtggaggggaggagctggtgctcaggttcgagccgatgatt
gtggcggtggagtgcagggatgctgcggcggccgcggcgctcgtcgccgtggcagtcggc
gcgggattccgggaatcaggtatcacaagcttgcaaagacgtgctatggtagcaataaga
tcctcaattcgcatggaggtccctattggcttgattgatggacttgtagtttctcccgag
tacatccggtaccttgttagaattgccaactgtaaaatggagtcaaacaagaagcgaatg
gatggatttctagatgttctgcagtcaaagggtctgccaggaatatctgggttgctagat
ggttgtaacaaaacagatagttgttgcttgggctccaaagttaagttgtcacacaatagg
actgtgcagacacataatgaagtgttagttgcagaaaagagaagcaacgactacagttgt
gaagctggcgagaaaggtgatggcgaaatttgtgagaagtcaatagaaggatcatatttt
gaaaatcgagaccctccacgcgacaacggtgccaagtatggttttggtaatgctgaacga
ttaatgcatgaggggaaattgtcagcgttatcacgaaataaatgttgccatctttctatt
actgatttgaagattagtggtgaaccgattgagaagctcttcttgtggggccaatctgcc
tgtgctgtaaatgttggaggagagcagcgggtcgtaacttttggtggttttggaggacct
gggaggcatgcaagaagaaattactcccttctgcttgatcagaaatctggcttgttgacg
gaaataaatgttaaagagtcaccttcaccacggatgggtcatacagttgctgtaatagac
aatcacatttatgctattggaggtagggctggtccttcagaaattcttgaagatgtctgg
gttttccaaagcactgagaatagatggtcaagagtagagtgcactggaaatattttccgt
ccaagacaccgacatgctgctgctgcagcagctttgaaaatatatgtgtttggtggactc
agtaatgaaggcatgtattcttgtatgaatatactggacaccgaaaacatgcagtggaat
gtgattgctgcagctagtgaatggccgtgtgctcggcattcacattctctggtgtcttat
ggttcaaagttgtacatgtttgggggtcatgatggtcagcgggcactaaacgacttctat
agttttgatataacaacgcttaggtggaacaaagaaagcactagtggaagaacaccatct
cctagattttcacattgcatgttcatctacaaacactatcttgggatacttggtggttgc
cctattagagaaaacaaccaagaagttgctctgctaagcttagagcatagagtttggttc
catgtttctattccatctctaggccaatgcctctgtgtccgtagctcagctgttgtcact
gatgatgatcttgttgtcgttggtggtggtgcatcttgctatgcatttggaacaaaattt
agtcaaccagtaaaaattgatcttcatttactggattcagtatttgaacttgtttacaag
aaaaatgacatggttatagaaagttttgatcaaatatctaccacaaatttacaagaacat
gagcaaaatggcacctttgttagtcatgatgtgaagtcactggttgatactgccgctagt
gatttttctgattcagaccctctagttctccaaatggaaaagaagtatgccaaattagca
aaggacattctgaaaaagtttggttggttggaccttgctagaaaagttcgagtcagccag
gataatgtccatgttctttttcctgttagtagaatctttcacaccctaatcattgatcat
cattccaagatgctagatgatgactcgtgtatctctgaaggagtatcagaatgtcctgaa
aagaaggttttaaatgctagcacttctcttcataaagctttggaaatattgtcatcatgc
catggttcccttttgaaagatgaactagcactcggccgaaaagcttttaagtcacctcaa
accatcatgagagaacttgtatcttctctactggaaagagaaggaatgccctctcagttg
ttacagcagctgccaactaggtgggaaaccctgggtgatatcactgtgcttccgaagact
tgttttaaggacccacaatgggaatcaattaaagaagaactttggcaactagttgccaag
ttgcttggggcacaacgtcttgcacgccaagggaaaatcatgccaaatggcacacgagat
agcacattagaacttctcgtgggtgataatggctgggtaacccactttgaaaatggcatc
tcgtattcacttgatgcaacaaaatgcatgttttcttctggtaatcgctccgagaagctt
cgcatggggcagcttgattgtagtgatgaagtggttgtggacttgttttctggaattgga
tactttgtgctcccatttcttgtgaaggctaatgccaagttggtttatgcatgtgaatgg
aatccacatgctctggaggctcttcaccggaatgtcagggacaaccgtgtagcagatagg
tgtgttatacttgaaggagataaccgtgtgatagcaccaaaaggggttgctgatcgtgtt
tgtcttgggctgataccctccagtgaatgtagctgggccactgctgttaaggctttaagg
gttgaaggaggcatgctgcatatacatgggaatgtcaacgactcagatgaagcgagctgg
ttggacagtgttgttgagtccatcagtaatactgccacaactcatggactatcttggaaa
gtctctctggagcatgtggaacgcgtcaaatggtatgggccgcatattcaacatgttgta
gttgatgtcagatgccaagcaaactga
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