Brachypodium distachyon (stiff brome): 100842806
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Entry
100842806 CDS
T01717
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100842806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100842806
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100842806
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
100842806
NCBI-ProteinID:
XP_003578983
UniProt:
I1IUS6
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All DBs
Position
4:47258613..47263862
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AA seq
441 aa
AA seq
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MPSFPPPGGVTVCEINRDLVVADSLSEDRAKEAYGDLLGMIFSPIPFQPDDLLTRHEAPA
PEDAVEPDAARTSLVSTMAESFKQMLFPSCDPKLLEEFDTQKVSWNPHKHCLAFVSGKDQ
VTVHDFEDSDGKESCILTSEHQKEVKAIEWRPNSGKMIAVGCKGVICLWSASYPGNVASV
KSGVTSSSFGAFPRGSRGQWVLVDVLRGTSTELVSALCWKPDGRYLASASCNGQSFTIWD
VSQGLGSPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSSSNGYVTGA
NWDPEGRVALLSFSNSTTLGSIHFSSKPPSLDAHLLPVELPEISSLIVSRGIEKLAWDAS
GERLALSFKDGNETYHGLVAVYDVRRSPLISVSLVGFIRGPGEGVKPLAFAFHNKFKQGP
LLSVCWSSGWCCTYPLILRSH
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcttccccccgccgggcggcgtcacggtatgcgagatcaaccgcgacctcgtc
gtggcggactccctgtcggaggatcgcgccaaggaggcctacggcgatctcctcgggatg
atcttcagcccgattcctttccagccggatgatctcctgacgaggcatgaggctcctgct
cccgaggacgcggtggagcccgacgctgccagaacaagtttggtgtccaccatggccgag
tccttcaagcagatgctcttcccttcttgcgacccaaagctgctagaagaatttgatacc
cagaaagtaagttggaacccacacaagcactgcttagcgtttgtatctgggaaggaccag
gtcacggtgcatgactttgaggattcagatggtaaagaatcgtgcattctaacaagtgaa
catcaaaaggaagttaaagctattgaatggaggccaaatagtgggaagatgattgcagtt
ggctgcaagggagttatatgcctctggtcagcatcatatcctggcaatgttgcatccgtg
aaatctggtgtcacctcttcttcttttggtgccttccctagaggttctcgtggtcaatgg
gtactagtggatgttcttcgtggcacttctactgagctagttagtgcactttgttggaag
cctgatggaagatacttggcctcagcctcttgtaatggtcaatcattcacgatttgggat
gtttctcaagggttgggatctcctataaggcgcggattgagtagtatatcattggtgcgg
tggtcacctagtggcgattactttttaactgctaaattcgatggaacttttcacttatgg
gaaaccaacacatggacatcagaaccctggtcttcgtctaatggatatgtaactggagca
aattgggacccagaaggtcgtgttgcattgttatccttttctaactcgaccacattaggc
tcaattcacttttcatcaaagccaccatctttagatgcccatctcctaccagtggaactt
ccagaaatttcctctctgattgttagccgaggcatagagaagttagcatgggatgcttca
ggagagcgtctggcattgtcattcaaagatggtaatgaaacatatcatggtcttgtggct
gtctatgatgtgaggaggtctccacttatctcagtctcgctagttggattcatcagagga
cctggagaaggcgtcaagccgcttgcattcgccttccacaacaaattcaagcaaggacct
ttgctctctgtgtgctggagcagtggctggtgttgcacatacccgttgattctccgatct
cactaa
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