Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0599
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Entry
BBDE_0599 CDS
T04222
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdn03019
]
BBDE_0599
03009 Ribosome biogenesis [BR:
bdn03009
]
BBDE_0599
Messenger RNA biogenesis [BR:
bdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBDE_0599
Ribosome biogenesis [BR:
bdn03009
]
Eukaryotic type
Pre-60S particles
RNases
BBDE_0599
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GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAQ26593
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Position
723980..724633
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AA seq
217 aa
AA seq
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MVDAHDGETYTAEGSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDFVIKP
SQKAVDHMNDFVRNMHTRSGLIKEWEHGLSLDEAQAKVVEYVKRFTPDGVKPLLAGNTIG
SDKKFLDHYMPELMEHLHYRTIDVSTFKELARRWYPAVYLNRPPKNGGHRALADIIESLD
ELRYYRKAFMAPTPGPDEAEAKAIADDIKATSLIGEN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgcgcatgacggcgaaacatacaccgctgaaggctcgcgtctgatctggatc
gactgcgagatgaccggcttggatatcttcggcggcgacgaactcgtcgaagtgtccgta
gtgccgaccgacttcgatctgaacgtgcttgacgagggcgtcgatttcgtgatcaagccc
agccagaaggccgtggatcatatgaacgacttcgtgcgcaacatgcatacccgctccggc
ctgatcaaggagtgggaacacggcctttctctcgacgaggcgcaagccaaggtcgtcgaa
tacgtcaagcgattcacgccggacggcgtcaagccattgctggccggcaacaccatcggc
tccgacaagaagttcctcgaccactacatgccggaactcatggagcacctgcattaccgc
accatcgacgtaagcacgttcaaggaacttgcccgtcgctggtatccggccgtctacctc
aaccgtcctccgaagaacggcggtcaccgcgcgctcgccgacatcattgagtccctggat
gaactgcgttactaccgcaaggcgttcatggcgccgacgccgggaccggatgaggccgag
gccaaggccatcgccgacgatatcaaggccaccagtctgatcggcgagaactga
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