Bdellovibrio sp. ZAP7: DOM22_13190
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Entry
DOM22_13190 CDS
T06441
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DOM22_13190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdz03400
]
DOM22_13190
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOM22_13190
DNA repair and recombination proteins [BR:
bdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DOM22_13190
RecFOR pathway proteins
DOM22_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
nSTAND3
AAA_14
AAA_22
Sigma54_activ_2
NB-ARC
RNA_helicase
AAA_3
AAA_2
AAA_18
AAA_24
DUF815
Rad17
TsaE
MCM
NTPase_1
NACHT
AAA_28
IstB_IS21
AAA_17
AAA_19
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QDK46041
UniProt:
A0A514XJU5
LinkDB
All DBs
Position
complement(2696646..2697680)
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AA seq
344 aa
AA seq
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MSRIIEGSILEDEITESASGGGGEKAWENELRPQDFAEFSGQDIVKDKIKVFVAAAKFRG
EPLDHVLLSGPPGLGKTTLAQIIANDMGSDIKMTSAPAIDKKGDLAAILTSLKPNSVLFI
DEIHRLSRHVEEYLYTAMEDYYIDIVTGDGLGARSMKFQLAPFTLVGATTRAGLLNPPFR
DRFGIVERLQFYDKEALQKILIRSARKLNVDIDNDGAAEVARRARGTPRIANRLLKRVRD
YAQVKGNGVVTQEIAIYALDQLGVDKHGLDLMDRRILSLIQEKYSGGPVGIDTIAAALSE
ERDTLEEVYEPFLIQEGFIQKTQRGRVITESAKKSVLEIIQAEN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcattatcgaaggcagtattttagaggatgaaatcactgaaagcgccagcggt
ggtggcggtgagaaggcttgggaaaacgaattgcgtccccaggatttcgctgagttttcc
ggacaagacatcgtaaaagataaaatcaaagttttcgtggcggctgcaaagttccgtggt
gaacctttggatcacgttttgctttcaggtcctccaggtttgggcaaaacaacacttgcg
caaatcattgcgaacgacatgggttctgatatcaaaatgacatcagctcctgcgatcgac
aaaaaaggtgatttggcggcgatcctgacttctcttaagccaaactctgtcctttttatc
gacgagattcatcgcttaagccgtcatgtggaagagtatctttacacggcgatggaagac
tattacatcgacatcgttacgggtgatggtttgggtgctcgctcaatgaaatttcagttg
gctcctttcacattggtgggagcgacaactcgagcgggactattaaatcctccatttcgt
gatcgttttgggattgtagaaagacttcagttttatgacaaagaagcccttcaaaaaatc
ttgatcagatcggctcgtaagctgaatgtggacattgacaatgatggagccgcagaagtg
gctcgtcgtgcgcgcggaacgcctcgtattgcgaatcgtctgttaaagcgagttcgtgat
tatgcacaagtaaaaggcaatggcgtcgtcactcaagaaattgcgatatatgctctggat
cagctaggggttgataagcacggcttggatcttatggaccgtcgtattttgagcctgatc
caagaaaaatattccggcgggcccgtaggtattgatacaatagctgctgcgctcagtgaa
gagcgtgacactcttgaggaagtgtatgagccattcctaatccaggaaggattcattcaa
aaaactcaacgcggtcgcgtgatcactgaatctgcaaaaaaatcagttttagaaatcatc
caagcggagaattaa
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