Betaproteobacteria bacterium UKL13-2: AEM42_06720
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Entry
AEM42_06720 CDS
T04342
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
beb03019
]
AEM42_06720
03009 Ribosome biogenesis [BR:
beb03009
]
AEM42_06720
Messenger RNA biogenesis [BR:
beb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AEM42_06720
Ribosome biogenesis [BR:
beb03009
]
Eukaryotic type
Pre-60S particles
RNases
AEM42_06720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AMS32166
UniProt:
A0A142LIX0
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All DBs
Position
1488393..1488944
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AA seq
183 aa
AA seq
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MAQDQNNLIWLDMEMTGLKPESDCIIEIAMVVTDAQLNTVAEAPVLVLHQPDSVLDAMDA
WNKSTHRKSGLIDKVKASSLSEAIVERQMIDFLREFVPASTSPMCGNSICQDRRFMAKWM
PQLEAYFHYRNLDVSTLKELAKRWKPTIMSGLTKHGKHEALADIYESIEELKYYREYFLN
LNT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagaccaaaacaatcttatctggctcgatatggagatgaccggactcaaaccg
gagtcagattgcatcatcgagatcgcgatggtggtcaccgatgcccaactcaatacggtc
gctgaggcgcccgtgctagtgctacatcagcccgactctgtgttggatgcgatggatgcg
tggaacaaatcgacgcaccgcaaatcgggcctgattgataaggtcaaggcatcgagcttg
agtgaggccattgttgaacggcagatgattgattttttgcgtgaatttgtgccggccagc
acctcaccgatgtgcggtaactctatctgtcaggatcgccgctttatggcgaagtggatg
ccgcagttggaagcatatttccattaccgcaatctcgatgtctccacactcaaagaactc
gccaaacgctggaagccaaccatcatgtcgggtctgacaaaacacggcaaacacgaggca
ctcgcagacatctatgagtcgatcgaagagctcaagtactatcgagagtatttcctcaat
ttaaacacctag
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