Bartonella elizabethae: NCTC12898_01094
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Entry
NCTC12898_01094 CDS
T06159
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bez
Bartonella elizabethae
Pathway
bez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC12898_01094 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bez03400
]
NCTC12898_01094 (xseA)
Enzymes [BR:
bez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC12898_01094 (xseA)
DNA repair and recombination proteins [BR:
bez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC12898_01094 (xseA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHR-2_Lobe_C
Motif
Other DBs
NCBI-ProteinID:
VEJ41654
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All DBs
Position
1:complement(1247925..1249355)
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AA seq
476 aa
AA seq
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MVGLFGEKTSATNVAEFTVSEIAGALKRVVEEKFGYVRVRGEISGYRGAHASGHAYFALK
DDKARLEAVIWRGSLEKLKFPPEEGMEVVAVGKLTTYLGSSKYQIVIEALEPTGVGALMT
LLENRKKKFAEEGLFDEAKKKPLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHVLVWP
VRVQGETSGSEVAAAVEGFNALASGGLIPKPDLLIVARGGGSLEDLWGFNDEAVVRAVYA
SDLPVISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKLDLEVSVASLGARLRKGLAR
SFDFHQQKLRAARRGLPTVDQLFALPRRGFDEISSRLQRALCASYDKKRFSFHALHLRLS
PRLLKSEKAQRHTKEYTARLHRAFMRSVEKKRAALELACRLLKSTSYQNILERGFVLALG
QDHKPIKRLAQFPESGQINLRFFDGDICVATQEPVSPTRSKHRKIKSPIDDQGTLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtttgtttggtgaaaagacaagtgcgacgaatgttgcggaatttactgtttcc
gaaatagcaggtgctttaaagcgtgttgtggaagaaaagtttgggtatgtacgggtgcgt
ggagagatctcgggttatcgcggtgctcatgcttcgggtcatgcttattttgccttaaaa
gatgataaggcgcggttggaagctgttatttggcgcggttccttggaaaagctcaaattt
cctcctgaagaagggatggaagttgttgctgtgggcaagcttacaacttatctagggtca
tcgaaatatcaaattgtcattgaggctcttgaaccaacgggggttggtgctttgatgact
cttcttgaaaatcgtaaaaaaaaatttgcagaagaaggcttatttgatgaagcaaagaaa
aagcctttgccttatatgcctcggattataggggttgtaacatcaccaacaggggctgtt
attcgcgatattattcatcgtatctctgatcgttttccgctgcatgttttagtttggcct
gttcgtgtgcagggagaaacaagcgggagtgaagtggctgctgctgttgaaggttttaat
gcacttgcttcaggagggcttattccaaagcctgatctgcttattgttgcacgaggaggg
ggaagtttagaagatttatgggggtttaatgatgaagctgttgttcgtgctgtttatgct
tctgacctccctgttatttctgctgttgggcatgaaacagactggactttgattgattat
gtcgctgattggcgtgctccaacccctacaggagccgcagaaaaggctgttcctgttaag
cttgatcttgaagtaagtgttgcatcacttggagcacgtttgcgtaaagggcttgcacgt
tcttttgattttcatcaacaaaagttgcgtgcagccagacgaggtcttcccactgtcgac
caactttttgctctaccgcggcgtggttttgatgaaatttcaagtcgattacagcgtgct
ctttgtgcgagctacgataaaaaacgtttttcttttcatgctcttcacctccgtctttca
ccccgtttgttaaagagtgaaaaagcacaacgtcacacaaaggaatatacagcgcgtctt
catcgtgcttttatgcgcagtgtagaaaaaaaacgtgcggcgttagagttggcatgtagg
cttttaaaaagcacttcttatcagaatattttagagcgtggttttgttttggctttgggg
caagatcataaacctattaaacggttggcacagtttccggaaagtggacaaataaattta
cgcttttttgatggagatatctgtgttgcaacacaagagcctgtttctccgacacgttca
aaacataggaagataaagtctccaattgatgaccaaggaacactcttttaa
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