Brachybacterium faecium: Bfae_14220
Help
Entry
Bfae_14220 CDS
T00965
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bfa
Brachybacterium faecium
Pathway
bfa03030
DNA replication
bfa03430
Mismatch repair
bfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bfae_14220
03430 Mismatch repair
Bfae_14220
03440 Homologous recombination
Bfae_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfa03032
]
Bfae_14220
03400 DNA repair and recombination proteins [BR:
bfa03400
]
Bfae_14220
Enzymes [BR:
bfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bfae_14220
DNA replication proteins [BR:
bfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bfae_14220
DNA repair and recombination proteins [BR:
bfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bfae_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACU85253
UniProt:
C7MCE6
LinkDB
All DBs
Position
complement(1601669..1603324)
Genome browser
AA seq
551 aa
AA seq
DB search
MSARRQLSFDDLGTPLAEATLVVVDLETTGTDPAADAITEIGAVKVRGGEVLGEFRTFVD
PERPIPAYIASLTGITDAAVAEAPSIRTVLPMFLDFAGDAALVAHNARFDIGFLSAQAAA
CEITWPRPRVLDTLALARTVFRRDEVRDHRLSTLARHVGAGITPDHRALSDARATVDVLH
AIIERLGPSGASTLEDLGTAHRRASPVQLRKKHLAEDVPPVPGVYQFLDAQGAVLYVGTS
RNVRSRVRTYFTAAETRRKVLDMLPRAESVRVIECATATEASIRELRIIGREKPPSNRHG
LHPEKAHWLRLGPGTQGLRTARLAKPEQDGSAQIGPLSSRHDAEPLRGLLTDAVMGRGAA
LDSPGRALPGGGHRERIRRAMTEDPTEVLDHVAGRLRSHVGAGRYEEAEKLRRLALAFLT
AARRASRLRALAEVPLLIAARPSTEAVIGGRGWELLAVRHGRFSGTTLVAAGKDPLPFAR
SLAMTGLGEAELAAPLCQGYHQEAEILLGWLEAEGVRTVLVEGTWQVPARARFDAEHLAQ
RFAATADAAEA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacgccgccagctgagcttcgatgatctgggcaccccgctggcggaggcgacg
ctcgtggtggtggatctggagaccaccggcaccgacccggcggccgacgcgatcaccgag
atcggtgcggtgaaggtgcgcggcggcgaggtgctcggcgagttccgcaccttcgtggat
ccggaacggccgatccccgcctacatcgcctcgctcacggggatcaccgacgccgccgtc
gcggaggccccgtcgatccgcacggtgctgccgatgttcctggacttcgccggggacgcg
gcgctggtcgcccacaacgcccggttcgacatcggcttcctcagcgcgcaggcggcggcc
tgcgagatcacctggccgcgcccccgggtgctcgacaccctcgccctggcccgcaccgtc
ttccgccgcgacgaggtccgcgaccacaggctctccaccctggcccgccacgtcggcgcc
ggcatcacgcccgatcaccgcgccctctccgacgcgagggcgacggtcgacgtgctccac
gcgatcatcgagcggctcgggccgagcggcgcctccacgctcgaggacctcggcaccgcg
caccgtcgggcctcgcccgtccagctgcgcaagaagcacctggccgaggacgtcccccca
gtgcccggggtgtaccagttcctcgacgcgcagggggcggtgctctatgtgggcacctca
cgcaacgtgcgctcccgcgtgcgcacctatttcaccgcggcggagacgcggcgcaaggtg
ctcgacatgctgccgcgggccgagtcggtccgcgtcatcgagtgcgccaccgccacagag
gccagcatccgggagctgcggatcatcggccgggagaaaccgccgtcgaaccggcacgga
ctccatcccgagaaggcgcactggctgcgcctggggcccggcacgcaggggctgcgcacc
gctcgcctggccaagccggagcaggacggctccgcgcagatcgggccgctctcctcccgg
cacgatgccgagccgctgcgcggcctgctcacggatgcggtgatggggcgcggggcggcg
ctcgactcccccggccgcgccctccccggcggcgggcaccgcgagcggatccgccgggcg
atgacggaggatcccaccgaggtgctcgatcatgtcgcggggcggctgcgcagccacgtc
ggcgcgggccgctacgaggaggcggagaagctgcgtcggctcgcgctcgccttcctcacc
gcggcccgacgagcctcccgcctgcgcgccctcgccgaggtgccgctgctcatcgccgcg
cggcccagcacggaggccgtgatcggcgggcggggctgggagctgctggcggtgcggcac
ggccgcttctcgggcaccaccctcgtcgccgcgggcaaggacccgctgcccttcgcccgc
tccctcgcgatgaccggtctcggcgaggcggagctggccgcaccgctgtgccaggggtac
caccaggaggcggagatcctgctgggatggctcgaggccgagggggtgcgcacggtgctg
gtcgaggggacctggcaggtgccggcccgtgcccggttcgacgcagagcatctcgcgcag
cgcttcgcggcgaccgcggacgccgcagaggcatag
DBGET
integrated database retrieval system
