Bacteroides fragilis BOB25: VU15_00820
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Entry
VU15_00820 CDS
T03897
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bfb
Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfb03032
]
VU15_00820 (gyrB)
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_00820 (gyrB)
Enzymes [BR:
bfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VU15_00820 (gyrB)
DNA replication proteins [BR:
bfb03032
]
Prokaryotic type
DNA Topoisomerases
VU15_00820 (gyrB)
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VU15_00820 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AKA50395
UniProt:
A0A0K6BQ12
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All DBs
Position
complement(195096..197054)
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AA seq
652 aa
AA seq
DB search
MSEEQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALA
GYCDHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGSYKVSG
GLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYPVKEVGIADHTGTKQQFWPDD
SIFTETIYDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKHETFYSEEGLREFVRF
IESSREHLINDVIYLNTEKQNIPIEVAIMYNTGFSENIHSYVNNINTIEGGTHLAGFRRA
LTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGA
VDQAVGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLA
DCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIR
NIYTALGVTIGTEEDSKAANIDKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQN
GYLYIATPPLYLCKKGKIEEYCWTDAQRQKFIDTYGGGSENAIHTQRYKGLGEMNAQQLW
ETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANIDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaacagaatcccaccaataacgggtcttattcagcagatagtatccaagta
ttggaaggacttgaagcagttagaaaacgccctgcgatgtacattggtgacatcagcgta
aagggacttcatcacttggtatatgaaattgtcgacaactctatcgacgaagcattggcc
ggttattgcgaccatatcgaagtaactatcaacgaagacaactctatcaccgtacaggat
aatggacgtggtattccggtagatttccacgaaaaagagcagaaatctgccctcgaagtt
gccatgaccgtactgcatgccggaggtaagttcgataaaggttcgtacaaagtatccgga
ggtcttcacggtgtaggtatgtcctgtgtgaatgcattgtctacacacatgactacccag
gtattccgcaacggtaaaatctatcagcaggaatatgaaatcggtaaaccgctttatccc
gttaaagaagtaggaatagcggaccacacaggaaccaaacagcaattctggcccgatgac
agtatctttaccgaaaccatttatgattataagattctggcttcacgtttacgtgaattg
gcttatctgaatgccggtctgcgcatctcgctgacagatcgtcgcgtagtgaatgaggac
ggcagtttcaaacacgaaactttctattcggaagagggtttaagagaatttgtacgtttc
atcgaatcgtcacgcgaacacttgattaacgatgtgatttatctaaacacagagaaacaa
aacatccccatcgaggtggctatcatgtacaataccggattttcagaaaatatccattcg
tacgtcaataacattaatactatagaaggtggtacgcatctggcaggtttccgccgcgcc
ctgacccgtacactgaagaaatatgcagaagacagcaaaatgctggagaaagttaaagta
gaaatctccggcgatgacttccgtgaaggtctgacagctgtgatctctgtaaaagtagct
gaaccccaatttgaaggacagactaaaactaagttgggaaacaacgaagtaatgggtgct
gtcgatcaggcggtaggcgaagtactaaactattatctggaagaacacccgaaagaggct
aaagcaattgtagacaaagtgattttggctgctactgcacgccacgccgcccgcaaagcg
cgtgagatggtacagcgtaaatctcctatgtcaggtggcggtcttccgggtaaactggcc
gactgctcggacaaagacccgcagaagtgtgagttattcctcgtcgagggagactctgcc
ggcggtacagctaagcaaggtcgtaaccgtgcatttcaggctattcttccactacgcggt
aagattctgaacgtagagaaagccatgtatcacaaagcgcttgaaagcgaagaaatacgc
aatatatacacggcactgggtgtcactatcggaacggaagaagacagcaaagctgccaat
attgataagctgcgctatcataaaatcattatcatgaccgatgccgacgtcgatggatca
cacatcgacacactgatcatgacttttttcttccgctatatgccacagatcatccagaat
ggctatctgtacattgccactcccccgctctacctttgcaaaaaaggaaaaatagaagag
tattgctggacagatgcgcaacgccagaagtttatcgacacttatggtggcggttcggaa
aatgcaatccatacacagcgctacaaaggtttgggtgagatgaatgcccagcagttgtgg
gaaacgactatggatccggaaaaccgtatgctgaaacaggttaatatcgacaacgcagca
gaagccgactatatcttctccatgttgatgggtgaagacgtaggtccacgccgcgagttc
attgaagaaaatgcaacgtatgcaaatatcgatgcataa
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