Bacillus freudenreichii: NCTC4823_02330
Help
Entry
NCTC4823_02330 CDS
T06767
Symbol
sbcC
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_02330 (sbcC)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC4823_02330 (sbcC)
Archaeal homologous recombinant proteins
NCTC4823_02330 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
LARA_dom
SMC_N
Motif
Other DBs
NCBI-ProteinID:
VEF48257
LinkDB
All DBs
Position
1:complement(2364008..2367142)
Genome browser
AA seq
1044 aa
AA seq
DB search
MKPLKLEMQAFGPYAGIEVIDFTQLQNRTMFVISGKTGAGKTSIFDGISFAIYGKASGED
RNGADLRSHFAKDDLPTEVSLEFQLRDKIYYIWRAPQQEKRKSRGDGYTIVNAKAELYIV
DGTGSRKLLAANVRETDEKIRGIIQLDANQFRQILMIPQGDFRKLLTSDSKEKEVILQRL
FHTQQYKKIEEKLKEKAGFLKGEVENGIDQRSRKLREIFTNGNDELEAALAEQTPSDTII
LPMLEAITVEMKQTLVEIEKNIKIKQKDRDEAKRKVDEAESILNEMKSRDDLAKQKANLD
EKKSLIEDKRKAVDLARRAANLEHQENICQRLKKDIDDILGKKNKVEKELAFISKEITSA
MEILKREEENKSKRESFHAEMTRLESLREEVLSFSKRKADLQRLEQEADNYRKLLEKGKL
TAAEWGEAIEKHQSDLNGLRQLQDHNVVLMEENLRLTQMIDLLDQLTGSIVDRKSANDRL
DQQDKALNLAKARAQDASATLKHIEEKWYKGQAAILASKLAAGSPCPVCGSSEHPLPAHT
VAGHISEEDLEAAKKDAQLIDEQLAEVRQTWMIAKADVDLCEKTVFEKLEAVKKLLPDAQ
LDNASHLLVELQDKKAEISNQLRNNTDQTNKIPELDDKLTKLTSSLKDLNREMEETAEKE
RVTANEYAETKAAVQSFTHNLPEGVENIEQFDKRVTYLRVKIQQFDEALNKAQQACNRLN
EQQAAQRMTLDNLKQDVEKVQNSLNVEREKFLSQLHQEGFAAYTEYAESKRDALWIQAAE
EEIKAYGEEYRSINDRLKDYETRLKGVDRPDIEKLDEAFKEQENSLLAMNGQFSSLLMNI
KKNEDVQSTVLSLNHQIKAIEKQYELIGHLADITRGQNTYKLTFERFVLASFLDDILTAA
NGRLLKMTSGRYQLLRKKERSKGNVQSGLELLVFDQYTGQERHVKTLSGGESFKAALSLA
LGLSDVVQEHAGGVSLETMFIDEGFGTLDPESLDQAIEALMEIQSSGRLVGIISHVPELK
ERIDARLEVLAGQSGSSTEFVFLS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactgaaattggaaatgcaggcattcggtccttatgcaggcattgaggtcatc
gacttcacccaattgcaaaaccggacgatgttcgtcatatctggaaaaaccggggccggt
aaaacctcgatatttgatgggatcagttttgccatatatgggaaagcaagcggagaggac
aggaacggcgcggatttacggagtcattttgcgaaggatgacctgccaacggaagtatcg
ttggaattccaattgcgagataaaatttactacatctggcgtgctcctcagcaggaaaaa
agaaaatcgcgcggtgacggatatacaatcgtcaatgccaaggcggagctgtatatagtt
gatgggacgggttcacgcaaactgcttgcggcaaatgtgagggaaacggatgaaaagatc
aggggaatcattcaactggatgcaaatcaattccgccagatattaatgattccccaaggt
gacttccgaaagctgctgacatcggacagtaaagaaaaggaagttattttacagcgactt
tttcatacccagcagtacaagaaaatagaagagaaactgaaagaaaaggcgggattcctt
aaaggtgaagtagaaaatggaattgatcaaaggagtcgaaagctcagagagatcttcact
aatggaaacgatgaactggaagccgctctggcagagcaaacacccagtgatacaatcatc
ctgcctatgctcgaagcaatcacagtggaaatgaagcaaacacttgtcgaaattgagaag
aacataaagattaaacaaaaagaccgtgatgaggcgaaaagaaaagtagatgaagcggaa
agcattttgaatgaaatgaaaagccgagacgacctggcaaagcaaaaagcgaatctggat
gaaaaaaagagtctgatcgaggataaaagaaaagcagtggatcttgcaagaagagcggct
aaccttgagcaccaggagaatatatgccaacgcttgaaaaaagacattgatgatatatta
ggcaaaaaaaacaaggtggaaaaagaactggcctttatttcgaaagaaataacctccgct
atggaaatactgaaacgtgaagaggaaaacaagagcaagagggagagctttcatgctgaa
atgacaaggcttgagagtttgcgcgaggaagttctttctttctccaagcgaaaagcggat
cttcagcggctggaacaagaggcagacaattatcgtaaattgcttgaaaaaggaaagttg
acggcggccgaatggggcgaagcgattgagaaacaccaaagtgatcttaacggacttaga
caacttcaagaccataatgttgtcctgatggaagaaaacctccggcttactcaaatgata
gatcttttagatcaattgacaggctctattgtagataggaaaagcgcaaacgaccgattg
gatcaacaggacaaagcgttgaatctggccaaagcgagagctcaagatgcgtcagctact
ttgaaacatattgaggaaaagtggtataaaggacaagcagcaatcctggccagcaaactg
gcagccggatcgccatgtcctgtctgcggctcttcggaacaccctctgccggcacatact
gtagcaggacacatcagtgaagaagatttagaagctgcaaaaaaggatgcgcaactaatt
gatgagcagcttgctgaagtaaggcaaacatggatgatagccaaagcggatgtcgattta
tgtgagaagacagtatttgaaaaactggaagccgtaaaaaaattattgccagatgcccag
ttggataatgcttcacatctcttggttgaacttcaggataaaaaagcggagatttccaat
caacttcggaataataccgatcaaacaaataaaatacctgagttggatgacaagttgaca
aaactaacaagcagtctcaaagatttgaacagagagatggaggagactgcagaaaaagaa
agagttactgcaaatgaatatgcagaaacgaaagcagcagtacaaagctttacccataac
cttccggaaggcgtagagaatattgagcaatttgacaagagggtaacctacttaagggtg
aaaattcagcaatttgatgaagctttaaacaaagcgcagcaggcttgcaacagactgaac
gaacagcaggcagcccaaagaatgacactggataatttaaagcaagatgtagaaaaagtc
caaaactcattaaatgtggaacgggaaaagtttttaagccaacttcaccaagaaggattt
gctgcttacactgaatatgctgaatctaaaagggatgctctatggattcaagcggccgaa
gaagagatcaaggcttacggtgaagaataccggtcaattaatgaccgccttaaagattat
gaaacacgcctaaaaggagtcgaccgaccagatattgagaagttggatgaagcattcaaa
gaacaggaaaattcactccttgcaatgaacggacaattttcaagcttattgatgaacatt
aagaaaaacgaagatgtccaatcaactgtccttagtttgaatcatcaaattaaagcgatt
gagaaacagtatgaactcattggacatttagccgatataacaagagggcagaatacatac
aagctgacgtttgagcgatttgtacttgcttcgttcttggatgatattctcacagctgcc
aacggaaggctattgaaaatgacaagcgggcgctaccagctattgagaaagaaagaacgt
tcaaaagggaatgttcaaagcggcttggagctgctcgtgttcgaccaatacacagggcag
gaacgccatgttaaaactttatcaggcggagaaagctttaaagcggcactttcgcttgca
ttgggcctgtcagatgttgttcaggagcatgcaggtggagtctcgcttgaaacgatgttc
attgatgaagggtttggtacactggaccctgaatctttggaccaggccattgaggcatta
atggaaatacaaagcagcggaaggcttgtcgggatcatttctcacgttccggaattgaaa
gagcggattgatgcccgtttggaagtgctggctggtcagagcggcagcagcactgagttt
gtatttttatcatga
DBGET
integrated database retrieval system