Bacteroides fragilis 638R: BF638R_0459
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Entry
BF638R_0459 CDS
T01691
Symbol
gadB
Name
(GenBank) putative glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg00250
Alanine, aspartate and glutamate metabolism
bfg00410
beta-Alanine metabolism
bfg00430
Taurine and hypotaurine metabolism
bfg00650
Butanoate metabolism
bfg01100
Metabolic pathways
bfg01110
Biosynthesis of secondary metabolites
bfg01120
Microbial metabolism in diverse environments
bfg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BF638R_0459 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BF638R_0459 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BF638R_0459 (gadB)
00430 Taurine and hypotaurine metabolism
BF638R_0459 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BF638R_0459 (gadB)
Enzymes [BR:
bfg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
BF638R_0459 (gadB)
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Gene cluster
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CBW21055
UniProt:
E1WKP2
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All DBs
Position
547054..548496
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AA seq
480 aa
AA seq
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MEDLNFRKGDAKTEAFGSNRMLQPSPVEKIPDGPTTPEIAYQMVKDETFAQTQPRLNLAT
FVTTYMDDYATKLMNEAININYIDETEYPRIAVMNGKCINIVANLWNSPEKDTWKTGALA
IGSSEACMLGGVAAWLRWRKKRQAQGKPFDKPNFVISTGFQVVWEKFAQLWQIEMRQVPL
TLDKTTLDPEEALKMCDENTICVVPIQGVTWTGLNDDVEALDKALDAYNAKTGYDIPIHV
DAASGGFILPFLYPDTKWDFRLKWVLSISVSGHKFGLVYPGLGWVVWKGKEYLPEEMAFS
VNYLGANITQVGLNFSRPAAQILGQYYQFIRLGFQGYKEVQYNSLQIAKYIHSQIAKMTP
FVNYSEDVVNPLFIWYMKPEYAKNAKWTLYDLQDKLAQHGWMVPAYTLPAKLQDYVVMRV
VVRQGFSRDMADMLLGDIKNAIAELEKLEYPTSTRIAQEKNLPVEAKVFNHTGKPQAAKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttaaatttcagaaaaggtgatgctaaaacagaagcatttggttcaaacaga
atgttacaaccctctccggtagagaaaatacctgatggtcctactactccggaaatcgcc
tatcagatggtgaaggacgaaacttttgctcaaactcagccccgtctgaatcttgctaca
ttcgtgactacttatatggatgattatgcaacgaagctgatgaacgaagctatcaatatc
aactacattgatgagacagaatatcctcgcattgctgtgatgaacggtaaatgtatcaat
atcgttgctaatttgtggaactctccggaaaaagatacctggaaaaccggtgcattggct
atcggttcttcagaagcttgtatgttgggtggtgtagctgcctggttgcgttggcgcaaa
aaacgtcaggcccagggtaaaccatttgataaacctaactttgtcatttcaaccggtttc
caggttgtttgggaaaaatttgctcagttgtggcagattgagatgcgtcaggtgcctttg
acgctggacaagaccacacttgacccggaagaagccctgaagatgtgtgatgaaaataca
atctgtgtagttccaatccaaggggttacatggaccggtctgaacgatgatgttgaagcc
cttgacaaagccctcgatgcgtataacgctaaaaccggttatgatattcctattcacgta
gacgctgccagcggtggtttcatcctgccgttcctgtatcctgataccaaatgggacttc
cgtctgaaatgggttctttccatcagtgtatccggccataagttcggtctcgtatatccg
ggtttgggttgggttgtctggaaaggcaaagaatatctgcccgaagaaatggctttcagc
gtaaactacttaggagctaacattactcaggtaggtttgaacttctctcgtcctgcagct
cagattttgggacaatattatcaatttattcgtttaggattccaaggatacaaggaagta
caatacaactctttgcagattgccaaatacatccacagccagattgctaagatgactccg
ttcgtcaactactcggaagatgtagtaaacccgttgttcatttggtacatgaagccggaa
tatgcaaagaacgccaaatggactctttacgatttgcaggataagctggctcagcatggc
tggatggttccggcatatacattgcctgccaaactgcaagattatgtggttatgcgtgtc
gttgtccgtcagggattcagtcgtgatatggccgacatgttgctgggcgacattaagaat
gctattgccgaactggaaaaactggaatacccgacatccactcgtattgcccaggagaag
aatctgccggtagaagccaaagtatttaaccataccggtaaaccacaagctgccaagaaa
taa
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