Brevibacillus formosus: BP422_12585
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Entry
BP422_12585 CDS
T04939
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bfm
Brevibacillus formosus
Pathway
bfm03030
DNA replication
bfm03430
Mismatch repair
bfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BP422_12585 (polC)
03430 Mismatch repair
BP422_12585 (polC)
03440 Homologous recombination
BP422_12585 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfm03032
]
BP422_12585 (polC)
03400 DNA repair and recombination proteins [BR:
bfm03400
]
BP422_12585 (polC)
Enzymes [BR:
bfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BP422_12585 (polC)
DNA replication proteins [BR:
bfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BP422_12585 (polC)
DNA repair and recombination proteins [BR:
bfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BP422_12585 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
HHH_3
DNA_pol3_a_NII
DNA_pol_A_exo1
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
ASJ54313
UniProt:
A0A220MH84
LinkDB
All DBs
Position
complement(2828447..2832751)
Genome browser
AA seq
1434 aa
AA seq
DB search
MDRLQEQKHRFSLLVKQMEVPDEWVERFFIDAQIEKLELYKQNKEWVFHFALPRMIPADV
YAAFTKRLTHTFSHLAKVDTRFRYHQKPSLDHVVEEYWDVLLAGLEPTLNSLAVTMRQAR
KQVDQQEVKVYLPTEMSVEVAKRKRADNELLAAFQKATDCSMRFTFHGEESDDAYKAFEE
QRKEEERALVEVVMTSVQQESKSSDKAEAVTTLMMGYEIKDAPIPICEIQDEERRIVIQG
TVFNVEVKELRSGRHLLTFNISDYTDSLTVKMFSRDKEDVKMLELLKDGMWVKVRGSVQH
DTFVRDLVMNANDLNQIEQVIRKDQAEEKRVELHCHTPMSALDAVASVKSLISTAAKWGH
KAIAVTDHGVVQAFPEAYSIAKKNNIKCILGMEAYVVEDGIDIVYNLQADNNLSIDENTE
YVVFDTETTGLNASEHTIIEIAAVKMKGAEIVDQWTELIDPQLEIGPKTTEITGITNEML
RGQETLDVVLRKFKDFTGDAILVAHNAEFDKAFINACAKRIGMEPWTNPFLDTLPLARLM
YKGMRNYRLGSLAKKFNVELINAHRALDDTVALAHVFQQMLKDIKEAEIKSLAELNEKSN
EEADYKSGRPFHATILVQNKEGLKNLYKLVSRSHVETFFRWPRIQRSQLTKYREGLLIGT
ACKEGELMQSILRGKSPEELKEVAAFYDFLELQPIAHYSPLLRNEEIPSLETMKGYHEKI
VQMGKELGKLVVATGDVHFLNPQDEIFRDVFLLSKGDPTAGNQPPLYFHTTDEMLEAFSF
LGEETAKEIVVTNTNAIADMIEDISPIPDKLYTPIIEGADDELRQMCYDKARSLYGDPLP
ELVEHRLEKELNSIIKHGFGVIYLISQRLVTKSLNDGYLVGSRGSVGSSFVATMSEITEV
NPLPPHYRCPNCKHSEFITDGSIASGFDLEDKACTQCGTMYAKDGQDIPFETFLGFKGDK
VPDIDLNFSGDYQPRAHKYTQELFGADYVYRAGTIGTVAEKTAYGYVRKYADERGMTLRN
AEISRIVNGCTGVKRTTGQHPGGIIVVPDYMEIEDFCPIQFPADDNESEWRTTHFDFHSI
HDNLLKLDILGHDDPTVIRMLQDLTGMDPKTIPLDDKKTMSIFSSTEALGVTPEQIGTNM
GTLGIPEFGTKFVRQMLEDTKPTTFAELVQISGLSHGTDVWLNNAQDLIRNGTCKLPDVI
GCRDDIMVYLIYKGLEPSRAFKIMESVRKGKGVPEDDQEEMRNNNVPEWYIQSCQRIKYM
FPKAHATAYVMMAVRIAYFKVHRPLEFYATYFTVRADDFDIPLMVKGSAAIKQKIEEIEG
KGHDAQPKEKALLTVLEMALEMIERGFRFANVDLYKSDATRFLIEGDSLIAPFNALPGLG
TNAAISIVAAREHGEFLSKEDLLSRSRISKTILEFLDEQGALKGLPESNQLSLF
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
gtggaccgtttacaagagcaaaaacatcgcttctccctattggtcaagcaaatggaagtt
cctgacgaatgggtggagcgattttttattgatgcgcagattgaaaagctagagctgtat
aagcaaaacaaagaatgggtttttcactttgccctcccgagaatgatacctgcggatgtt
tatgcagcttttaccaagcgattgacgcatacattttcacatctagccaaagtagatact
cgatttcgttatcaccaaaagccgtctctcgatcacgtagtcgaagagtattgggatgtc
ttgctagcggggctggagccaactctgaactccttggcagttacgatgcgtcaagcgcgt
aagcaagtcgaccaacaggaagtcaaggtgtacttgccaacggagatgtccgttgaggta
gccaagcgaaaacgagcggataatgagcttttggctgccttccagaaagctaccgattgc
tcgatgcgctttactttccatggggaagaaagcgatgacgcgtataaggcctttgaggag
caacggaaagaagaagagcgtgctctcgtcgaagttgtgatgacgtctgttcaacaggag
agcaaatcgtctgataaagctgaggctgtcactacgcttatgatgggttatgaaatcaaa
gatgcgccgatcccgatttgcgagattcaggatgaggaacgccgtatcgtcatccaagga
accgtatttaacgtagaagtaaaagagcttcgcagtggacgtcatttgctcacgttcaac
atttctgactatacggattctctcacggtaaagatgttctctcgcgataaagaagatgtg
aaaatgctcgaattgctgaaagacggcatgtgggtgaaagtgcggggaagtgtacagcat
gatacgtttgtacgcgatctcgttatgaatgccaatgatttgaaccagattgagcaggtc
attcgcaaagatcaagcggaagagaagcgcgtcgagctccattgccatacgccgatgagt
gcgctggatgccgttgcatctgtaaaatcactgatctcgacggcagcaaagtggggtcat
aaagcaattgctgtcactgaccatggtgtcgtacaggcttttccagaggcgtattccatc
gccaaaaagaacaacatcaaatgcattctcggtatggaagcgtacgtagtcgaggatggc
atcgatatcgtttacaacctgcaagcagacaataatctttccattgatgaaaatacggaa
tatgtcgtgtttgatacggagacgacggggttaaacgcgtcagagcatacaatcatcgag
atcgctgctgtcaaaatgaaaggcgcggaaattgtcgaccaatggacggagctgattgac
ccgcaattggaaattgggccaaagacaaccgagattacggggattaccaacgaaatgctc
cgcgggcaagagacactcgatgtggtactccgcaagttcaaagattttactggtgacgcc
atcctggttgcacataatgcagagtttgacaaggcgtttattaacgcctgcgctaagcgg
attggcatggagccatggaccaatccatttttagatacgctgcctttggcgcgcttgatg
tacaaaggaatgcgcaattatcgtttgggatcattagcgaaaaagttcaacgtcgagctc
atcaatgcccaccgtgcgttggacgataccgtggccttggctcacgtgttccagcaaatg
ttgaaggacattaaagaagcggaaatcaaatcgctagcagagttgaatgaaaaaagtaac
gaagaggccgactataaaagcggacgtccattccatgcgacgattctcgtgcaaaataaa
gagggcctcaaaaacctatacaagctcgtaagtcgctcccatgtggaaacattcttccgg
tggccaagaattcagcgaagtcagttgaccaaatatcgcgaaggtttgttaatcggtacg
gcgtgcaaagagggagaactcatgcaatcgattctccgcggtaagtcacctgaagaattg
aaggaagttgctgctttttacgactttttggaattacagccgatcgcccattactcacca
ctgttgcgtaatgaagaaattccttcgctggagacgatgaaaggctaccatgaaaagatc
gtccaaatgggaaaagagctcggtaagctggtcgtagctacaggggatgtgcacttcctg
aatccccaggatgaaatcttccgcgatgttttcttactgtcaaaaggtgatccaaccgca
ggcaaccagccaccgctttacttccatacaacggatgagatgctggaggcgttctccttt
ttgggagaagagaccgcaaaagaaatcgtcgtgacgaacacaaatgccatcgcggatatg
attgaggatattagtccgattccagacaagctgtacacgccgatcattgaaggagcggac
gatgagctgcgtcaaatgtgttatgacaaagcaaggtcgttgtatggtgacccattgccc
gaactggtcgagcatcgcttggaaaaagaattgaacagtatcatcaagcacggcttcggt
gtgatttatttgatttcgcagcgtttggtaacgaaatcgttgaatgatggttatctggta
ggttcacgtggatctgtaggctcgtcttttgttgcgacgatgtctgagattacagaggta
aacccattgcctcctcactatcgctgcccaaattgcaagcacagcgagtttattacagat
gggtcaatcgcctctgggtttgacttggaagataaagcatgtacacaatgtggaaccatg
tatgccaaggatggacaggacatcccgttcgagacgttcctcggctttaaaggcgacaag
gtaccggatattgacttgaacttctctggtgattatcagccgcgtgcacacaagtacaca
caggagctgttcggagcagactacgtatatcgcgcaggaacgattggtactgttgcggaa
aaaacagcgtatggctacgtgcgcaagtatgccgacgaacgaggcatgacgttgcgcaat
gcggagatatcccgaatcgtcaacggctgcacaggtgtaaaaaggacaacagggcagcat
ccgggcggtattatcgtagttcctgactacatggaaattgaagacttttgtccgattcag
ttcccggctgatgataatgagtcagaatggcgcacaacccatttcgacttccactccatt
catgacaacttgctaaaactcgatattctaggacacgacgatccgaccgtcattcgtatg
ctgcaagacttgacgggaatggacccaaagacgattccactggatgataaaaagacaatg
tctatcttcagttcgacggaagcgctgggggttacaccggagcaaatcggtacgaacatg
gggacattgggtattcctgagttcggaaccaaattcgtacgacagatgctagaagacacc
aaaccgactacgtttgccgagcttgttcagatttctggactctctcatggtacggacgtt
tggttgaacaacgcgcaggacttgatccgcaacggtacttgcaagctgccagacgtaatt
ggttgtcgtgacgatatcatggtgtatttgatctataaaggtctagagccgtcccgtgcc
tttaagatcatggagtccgtacgtaaaggtaaaggggttcctgaggacgatcaggaagaa
atgcgcaataacaacgtgccagaatggtatattcagtcgtgccagcggatcaagtacatg
ttcccgaaggcgcatgcgactgcctacgtcatgatggctgtacggattgcatacttcaag
gttcatcgcccattggagttttacgcgacgtatttcactgttcgcgcagatgattttgat
attccgctgatggtcaaaggctcagcggcgatcaagcaaaagattgaagagatcgagggc
aagggacacgatgcacagccaaaagaaaaggcattgctgactgtcttggagatggcgttg
gaaatgatagagcggggctttcgctttgccaacgttgatttgtacaaatcagacgccacg
cgcttcttgatcgagggagattcgcttatcgctccatttaacgccctgcctggcttaggg
acgaacgcggcgatcagcatcgtagctgcgagagagcatggagagtttttgtccaaggag
gacctcctatcccgatcacgcatctccaagaccattttggagttcttggacgagcaaggt
gctttgaaaggattgccagaatccaaccagctatccttgttctaa
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