Brevibacillus formosus: BP422_15950
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Entry
BP422_15950 CDS
T04939
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bfm
Brevibacillus formosus
Pathway
bfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BP422_15950
09124 Replication and repair
03420 Nucleotide excision repair
BP422_15950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfm03021
]
BP422_15950
03400 DNA repair and recombination proteins [BR:
bfm03400
]
BP422_15950
Enzymes [BR:
bfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BP422_15950
Transcription machinery [BR:
bfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BP422_15950
DNA repair and recombination proteins [BR:
bfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BP422_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ASJ54924
UniProt:
A0A220MIL7
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All DBs
Position
3522666..3524330
Genome browser
AA seq
554 aa
AA seq
DB search
MSYRPDLPLIVQSDRTILLETQHPLFPEARQAISGFTELIKNPEYIHTYRITPLSLWNAA
ASGLTSQEVTDVLGSYSKYGVPPTIVKEIEDTMRKYGLFRLERIGDQLVLMSDDPLLLAE
VTSYKSIAALFESEFVIKSYARGLIKQELIKLGFPVQDLAGYTEGESCAVSLRETTSRGR
AFSLRAYQKEAVDAFYSGGAVTGGSGVLVLPCGAGKTVIGLGAICQLQTATLILTTNTTS
VRQWIAELLDKTGLDPNMVGEYTGDNKEVKPITVATYQILTYRPTAEDDFPHLKLFSERD
WGLIIYDEVHLLPAPIFRVTSGIQATRRLGLTATLVREDGREEDVFTLIGPKKYEVPWKV
MEEQGWIAEAHCREIRLPFEPKWREAYAHATARQKFRIAAENPKKLEVVRELLERHAHDR
VLIIGQYIDQLEQMATALQLPLITGKVPDKERELLYTQFKKGEITRLIVSKVANFAVDLP
DANVAIQISGTYGSRQEEAQRLGRILRPKTDDNTAHFYTLVTRDTREQEFSLHRQLFLVE
QGYPYDIIESETLV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctaccgtccagacctacccttgatcgttcaaagcgatcggacgatattgttggaa
acacagcatcctttatttcccgaggccagacaagctatcagcggttttactgagctaatc
aagaacccagaatacatccatacctatcggattacccctttatcgctttggaatgcggct
gcatccggtctcacatcacaagaggtaacagacgtgcttggcagctacagcaagtacggt
gtcccgcccaccatcgtcaaagaaattgaagatacgatgcgaaaatacggcttgtttcgt
ttggaacgcattggcgatcaactcgtattaatgagtgatgacccgcttcttttagcagag
gtgaccagttataaatcaatcgctgctctttttgagagtgaatttgtcatcaaaagctat
gcgcgcggactgatcaaacaagagctgatcaagctcgggtttcctgttcaagatttggcg
ggctatacagaaggcgaatcctgtgcagtcagcttgcgagaaacgacatcccgaggcaga
gcattttctttgcgtgcttatcaaaaagaagctgtcgatgccttctattccggaggcgct
gtcaccgggggaagcggcgttctcgtcctaccctgtggtgctggaaaaacagtcattgga
cttggtgccatttgccaattgcaaacagccaccctcattttgaccacgaatacgacatcg
gttcgccagtggatcgcagagctcctggacaaaacaggacttgatccaaatatggtcggg
gaatacactggtgacaacaaagaagtcaagccaataactgtggcgacttatcaaattctt
acataccgccccaccgccgaagatgattttcctcatctgaaactcttttcagagcgcgac
tgggggcttattatttacgatgaggtgcatttgttgcccgcacccatctttcgtgtaact
tctgggattcaagccactcgcagacttgggctgactgctactcttgttcgggaagacggg
cgggaggaagatgttttcacgctgattggtccaaaaaagtatgaggttccttggaaagtc
atggaagagcaaggctggatcgcagaggcgcattgccgagaaattcgactcccttttgag
ccgaagtggcgggaggcttatgcacatgcaaccgctcgtcaaaagtttcgcattgcagcg
gaaaatccaaaaaaactggaggtcgtccgcgagctattggagaggcacgcccacgatcgc
gttttgatcatcgggcaatatatcgatcagcttgagcagatggcaacggccctccaactg
ccactcattacaggaaaagtaccggacaaagaacgtgagcttctgtacacgcagtttaaa
aaaggggaaattacacgcctgatcgtatccaaggtagccaactttgcagttgatttgccg
gatgccaacgtcgcgatccaaatctccgggacgtatggttccagacaagaagaggcacag
cgcctgggacgtatcttaaggcccaaaacagacgataacaccgcccatttttatacattg
gtaacacgagacacgagagagcaggagttttcgctccatcgccagctttttctggtcgaa
cagggctatccatacgatattatagaaagcgaaacactggtctga
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