Paraburkholderia fungorum: OI25_2905
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Entry
OI25_2905 CDS
T03799
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
bfn
Paraburkholderia fungorum
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
OI25_2905
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Gene cluster
GFIT
Motif
Pfam:
Tex_N
Tex_YqgF
HHH_3
HHH_9
S1
YqgF
HHH_7
T2SSK
PsbU
HHH_6
DUF460
AAA_lid_7
Motif
Other DBs
NCBI-ProteinID:
AJZ59811
LinkDB
All DBs
Position
1:complement(3266658..3269000)
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AA seq
780 aa
AA seq
DB search
MTETVALKIVQRIAAELSVQPRQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLE
ERLLYLRELEDRRATIVASIDEQGKLTDELRTAIEGADSKQVLEDLYLPYKPKRRTRAQI
AREAGLQPLADALLANPLLDPQTEAAAYVDAEKGVADVKAALDGARDILSEQFGETAELL
GKLRDYLFNQGVVSSKVVEGKEHAEEEKFRDYYDYAETIRTVPSHRALALFRGRNAGVLM
VKLGLGEELDAQVPHPGEALIARHFGIANQNRPADKWLADVCRWCWRVKVQPHIENELLT
NLRDEAEHEAIRVFARNLKDLLLAAPAGPKAVIGLDPGMRTGVKVAVVDRTGKVLATDVI
YPHEPRRDWDGSIAKLARLCAQTQAELISIGNGTASRETDKLASELIARHPEFKLQKIVV
SEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASVALLARVSGLNATLARNIVDYRDANGPFPSREH
LRKVPRLGDKTFEQAAGFLRINNGENPLDRSSVHPEAYPVVERILAKISKHVGEVLGNRD
ALRGLSPAEFVDERFGLPTVRDILLELEKPGRDPRPEFKTATFREGVEKVSDLTPGMVLE
GVVTNVAAFGAFIDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQIVKVKVLEVDVKRQRI
ALTMRLDDEFGAAAAPRSGGGAQQDRGRSGGGGRGAQQQRSREPEAGGAMAAAFAKLKQK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccgtagcactcaagatcgtacagcgcatcgccgccgaactgtccgtccag
ccgcgccaggtcgcggccgcggtgcaacttctcgacgaaggagcgactgttccgttcatc
gcccgctaccggaaggaagtgaccgacaatctcgacgacacgcaactgcgtaacctcgag
gaacgcctgctgtatctgcgcgaactggaagaccggcgcgccacgatcgtcgccagcatc
gacgaacagggcaagctcaccgacgagctgcgcaccgcgatcgaaggcgccgacagcaag
caggtgctggaagacctgtatctcccgtataagccgaagcgccgcacgcgcgcgcagatc
gcccgcgaagccggcctgcagccgctcgccgacgccttgctggccaacccgctgctcgac
ccgcaaaccgaagccgcagcctacgtggacgccgaaaaaggcgtggccgacgtcaaggcc
gcgctcgacggcgcgcgcgacattctctccgagcagttcggcgaaaccgccgaactgctc
ggcaagctgcgcgactacctgttcaaccagggcgtggtgtcgtcgaaagtggtcgaaggc
aaggaacacgcggaagaagaaaaattccgcgactactacgactatgcggaaaccatcagg
accgtgccgtcgcatcgcgcgctggccctgttccgcggccgcaatgccggcgtgctgatg
gtcaagctcgggctcggcgaggagctcgacgcgcaggttccgcatccgggcgaagcgttg
atcgcccgccacttcggcatcgccaatcagaaccgcccggccgacaagtggctcgccgac
gtgtgccgctggtgctggcgcgtgaaggtgcagccgcacatcgaaaacgagctgctgacc
aatctgcgcgacgaagccgaacacgaagcaattcgcgtgtttgcgcgcaatctgaaggat
ctgttgctcgccgcgcccgccgggcccaaggccgtcatcggcctcgatccgggcatgcgc
accggcgtgaaagtcgcggtagtcgatcggaccggcaaggtgctcgccaccgacgtgatc
tatccgcacgagccgcgccgcgactgggacggctcaatcgcgaaactggcgcgcctctgc
gcgcagactcaggctgagttgatcagtatcggcaacggcacggcatcgcgcgaaacggac
aagctcgcgagcgaactgatcgcgcgtcatccggagttcaagctgcagaagatcgttgtg
tcggaagccggcgcgtcggtgtactcggcctccgaactcgcggcgaaggaattcccggac
atggacgtgtcgctgcgcggcgccgtgtcgattgcgcgccgtctgcaggacccgctcgcg
gaactggtgaagatcgagccgaaggcaatcggcgtcggccagtatcagcacgacgtgaat
caacgcgaactggcccgctcgctcgatgcggtggtcgaggattgcgtgaacgcggtcggt
gtggacgccaacacggcatcggtcgccttgctcgcgcgcgtgtcgggtctgaacgccact
ctggctcgcaacatcgtcgactatcgcgatgcaaacggtccgttcccgtcgcgcgaacat
ctgcgcaaggtgccgcgcctcggcgacaagaccttcgagcaggccgccggattcctgcgc
atcaacaatggcgaaaatccgctcgatcgctcgtcggttcacccggaagcctatccggtc
gtggaacgcatcctcgcgaagatcagcaagcatgtcggcgaagtgctcggcaatcgcgac
gcgctgcgtggcctgtcgccagcggaattcgtcgacgaacgtttcggtctgccgaccgtg
cgcgacatcctgctggaactcgagaagccgggccgcgacccgcgccccgagttcaagacc
gcgaccttccgtgaaggcgtcgagaaggtcagcgacctgacgccgggcatggtgctggaa
ggtgtcgtgacgaacgtggcggccttcggcgcgttcatcgacatcggcgtgcatcaggac
ggcctggtgcacgtgtcggcgatgtcgacgaagttcatcaaggacccgcacgaagtggtc
aaggccggccagatcgtcaaggtaaaggtgctggaagtcgatgtgaagcgccagcgtatc
gcgctgaccatgcgtctggacgacgagttcggcgcggcagccgcgccgcgcagcgggggc
ggcgcccagcaggatcgtggccgctccggcggcggtggacgcggtgcgcaacaacagcgc
tcgcgcgaaccggaagcaggcggtgcaatggcggccgcgttcgccaagctcaagcagaag
taa
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