Paraburkholderia fungorum: OI25_3963
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Entry
OI25_3963 CDS
T03799
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bfn
Paraburkholderia fungorum
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfn03021
]
OI25_3963
Transcription machinery [BR:
bfn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OI25_3963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
DUF134
HTH_30
Sigma70_ECF
DUF5753
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AJZ58026
UniProt:
A0A2T1A7H7
LinkDB
All DBs
Position
1:complement(4442733..4443275)
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AA seq
180 aa
AA seq
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MNFEAEVISWLPQLRRYARALTGDRAWADDLVQDTAERALARWAAFRPNSNLRAWLLTIL
RHLYIDQLRGRREIAVDDESAPWRTLEAPHGEVDGLVLRDLQRALYCLPVEQREVLLLVC
VEELSYQEASKALGVPIGTVMSRLSRAREHMRVLMTDGPLEGDAVGLARKVPPLKVVRNP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttcgaagccgaagtgatttcgtggctcccgcagctgcgccgctatgcgcgcgcg
ctgacgggcgaccgcgcgtgggccgacgacctcgtgcaggatacggcggagcgcgcactc
gcgcgctgggcggcgttccgtccgaacagcaatttgcgggcgtggctgctgaccatcctg
cggcatctttacatcgatcagttgcgcggccgccgcgagattgccgtcgacgacgaaagc
gcgccatggcgcactctcgaagcaccgcatggcgaggtcgatggcctggtcttgcgcgat
cttcagcgtgcgctgtattgcctgccggtcgaacaacgcgaagtgctgctgctggtttgc
gtggaggaactgtcatatcaggaagcgtcgaaggcgctcggtgttccgatcggcacggtg
atgtcgcgcttgtcgcgcgcgcgggaacatatgcgcgtgctgatgacggatgggccgctc
gaaggggacgccgttggattggcgcgtaaagtcccgccgctgaaagtagtgagaaatccg
tga
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