Branchiostoma floridae (Florida lancelet): 118415755
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Entry
118415755 CDS
T01074
Name
(RefSeq) helicase ARIP4-like isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118415755
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118415755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_14
Motif
Other DBs
NCBI-GeneID:
118415755
NCBI-ProteinID:
XP_035676440
UniProt:
A0A9J7L6G6
LinkDB
All DBs
Position
5:20199464..20220445
Genome browser
AA seq
1613 aa
AA seq
DB search
MPHSLTVVRVTMEEEDFSGDSELDQLSDAGDELDFEEEQWGGGSRSSSRASQQSRSSTPG
GRSNQDSIDMGGAEACADSKQSHEVGDNKPNEAEGEATSTTFNDGSQTAEGKGKKRKKKT
PQQPGEKKKRKKKEGGEKKKKKSKPGHLRRNIRKLKGEDTLEAETLAAQQEEMERKRRLE
MQRSQNLPTPGFMAQDMDLADLDFGTGQLDFSSLVEAEAELAPSMYTEPAIPEPVPVPTT
EQPATSTDQPTELKLEPKAEETPTEDITVPKVTPPPPPMMPQKADDSDDVICIDSSSGEE
ESAETKSKHAKTTKSPREDVVELASSDDDVMIVSGDDEDQEEEEEEDDTGNSGSHTDDAT
NQPDALGKVLINVNHPSTESDIFLSPQLGRSVKPHQIGGIRFLYDNLVESLERYKSSGGF
GCILAHSMGLGKTLQLISFIDVFLRHTEAKTVLCIVPINTLQNWSAEFNMWLPTKEAVDT
AIQQGIAQEGEIQHREFGVYLLNDNYRTNLARAKLIDKWFKTGGVLLMGYEMYRLLISKK
IMLTNNKKRRGKQPKDMEVIDLEEEDTNLAILHGVYKALAKPGPDLVICDEGHRIKNAHT
SVSQTLKNIRTKRRVVLTGYPLQNNLMEYWCMVDFVRPNFLGTRQEFSNMFERPIQNGQC
IDSTPEDVRYMRYRAHVLHSLLEGFVQRRGHAVLKSVLPPKYEHVLLVRMSAIQRELYAK
FMTAFREAGAAGWSNNNPLRAFSVCCKIWNHPDILYEILQKKMTNDDLDIEDPEGLGNKS
RSRSNTPTIPDGSRRSGSPAVPLIASTSGVTDENSNSNSSSKDRRFTQDVGLTPFQEKAN
QGTNYNWAEDCMKDYTPGVLENGGKMLLLFKIIEQSIRGGDKLLVYSQSLNTLSLIEEFL
AKTPMPEPPNGFPHNIPLRWAKNKTYYRLDGGTSGQDREKMINQFNVPNSPTWLFLLSTR
AGCLGVNLVGANRVVVFDASWNPCHDCQAVCRVYRYGQTKPCHIYRLVTDKSLEKKIYDR
QVNKQGMSDRVVDELQPESNFTRKEVEDLFSYDDSDPVYEDFSQDAAQFADSILQDICTE
HSKLITKAPFQHESLLIDRKDHKLTKAEKRAAKKGYEQEKRMSVSNYSRPSYSAFYPQQQ
SGGTPGSSGGTASISSLISFARAQTGMPPMIHRPVANVRPIQSTPIPMQPRTSGSNDVQV
FQRGGHNIMVNHVKTTMDIPIPGSASSTSSAQKIPAGTQITVIRTHRGMYIRTNDGKIFA
VRAGAPGMSQVLRGSLGSAQSNSGSQGIPVQAGGPSLSATAVNEAIGSAAASSATSGQPF
PRPAATSAPMVSALLSGTPSRESPGLGRVMPMTSVTTSTSTSGNNTASSSEATATRQGYS
SASTAEVSPFLTTSSREPDGKQDGNSSEADKSMAQRPESTGGLSSGSSQSRPASQNLERT
SPISQAADSSVPAVTSSGVPPSVAPLVSQQNTTQSMGLPNFSFPTPSQGQALNMNIPGMG
NISPSPLQNLMTFVPSYLNPGSAQPQPGMIPSMYNYPGMMPPFGLVAAPLPFLPSAPPPN
MQATLGNAVPLSGYPPQPGMAIPTTTTTSQEPAKSTEEMSSSPFNLDDIVQLD
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttgactgttgtaagggttacgatggaagaagaagacttttcaggtgac
agtgagttggaccagctgtcagatgcaggagatgaacttgactttgaagaggagcagtgg
ggaggggggtccaggtccagcagtagggcatctcaacagtcaaggtcatcaacaccaggg
ggaagatctaaccaagactccatagatatgggaggagcagaggcctgtgcagattcgaaa
cagtcacatgaagttggtgacaacaagccaaatgaagctgaaggagaagccacatctaca
accttcaacgatggcagccagacggcagaagggaaagggaagaaaagaaagaaaaagact
ccacaacaacctggagagaagaagaaacgcaagaagaaagaaggaggagagaaaaagaag
aagaaatctaaaccgggacatcttcggagaaacataagaaaacttaagggtgaggacacc
ctggaagcggagaccctggcagcccagcaggaggagatggagaggaagagacgtcttgag
atgcagcgctcccagaacctgcccacacctggcttcatggctcaagacatggacctagca
gacctggactttggcacgggccagctagacttcagcagtcttgtggaagcagaggcagag
ttggcaccctctatgtacacagagcctgcaataccagaacctgtacctgtacccacaaca
gagcaacctgcaacatctacagaccagcctaccgagctgaaactggaacccaaggctgag
gaaacacccacagaagatataactgtgccaaaggtcaccccacctccacctcccatgatg
ccgcagaaggctgatgacagtgatgatgtcatctgtatagacagtagtagtggagaggag
gagagtgcagaaacgaagagcaaacatgcaaaaacaaccaagtcacctcgtgaagatgtg
gtcgagttggcgagttctgatgatgatgtgatgattgtgagtggtgatgatgaagaccag
gaggaagaggaggaggaggatgatacagggaacagtgggtctcacacggatgatgcaact
aaccagcccgacgccctggggaaggttctgatcaatgtcaatcatccgtcaacagagtct
gacatcttcctgtcacctcagctggggaggtctgtcaagcctcatcagattggaggaatc
cgtttcttgtacgacaatctggtggagtccttggagagatacaaatcctcgggtgggttt
ggctgcatcttggctcatagcatgggcctggggaaaactctacagttgatctcctttatt
gacgtgttcctgagacatacagaagccaagacggtgctgtgtatcgtccccatcaacacc
ttacagaactggtcagcagagttcaacatgtggctgcccactaaggaggcagtggacact
gctatccagcaggggatagcacaggagggggagatccagcatagggagtttggggtgtat
cttctcaatgataactacagaaccaacctggcaagggccaagcttatcgataagtggttt
aagacaggtggtgttctcctgatggggtatgagatgtacagactgctcatctccaagaag
atcatgctgacaaacaacaagaagaggagaggcaagcagcccaaggacatggaggtcatt
gacctggaggaagaggacacaaaccttgcaatactacatggagtgtacaaggcccttgct
aagcccggtccagaccttgtgatctgtgacgagggacatcgcatcaagaatgcccacacc
agcgtgtcacaaacactcaagaacatcaggactaagaggagagttgtgctgaccgggtac
cccctacagaataacctgatggagtactggtgcatggtggattttgtcaggcccaacttc
ctgggtacacgccaggagttcagcaacatgttcgaacggcccatccagaatggacagtgt
atagacagcactcctgaggatgtgagatacatgcggtatcgagcacatgttctccatagt
ttattggagggatttgtccaaaggagaggccatgcggtactgaagtctgttcttccaccc
aagtatgagcacgttctgctggtcaggatgtccgccatacagcgtgaactgtacgccaag
ttcatgaccgcgttcagggaggcaggtgcagccggttggagcaacaacaatcctctcagg
gctttctcagtttgttgcaagatctggaaccatccagacatactgtatgagattctgcag
aagaagatgacaaacgatgaccttgacattgaggatccagaagggttaggcaacaagtca
aggtcaaggtcaaacaccccaaccataccagatgggtccaggaggtcagggtcaccggca
gtaccattgatagcttccacctctggggtaacagatgagaacagcaacagtaacagcagt
agcaaggaccgcaggtttacgcaggacgtcggactgacaccattccaggagaaagccaac
cagggcactaactacaactgggcagaggactgtatgaaggactacacccccggtgtgctg
gagaatggaggcaagatgctgctgctcttcaagatcatagagcagagcatcaggggaggg
gacaaactgcttgtctatagccagagtttgaacaccttatccctgattgaagagttcctg
gccaaaactccaatgccagaaccaccgaacggcttcccacacaacatccctctcagatgg
gccaagaacaaaacatactacaggttggatggcggcacatcaggacaggacagggagaaa
atgatcaatcagttcaacgttcccaacagtccaacatggctgtttcttctctctactagg
gctggttgtctgggtgtgaatctggtgggagccaacagagtggtcgtgtttgatgcatcg
tggaacccgtgtcacgactgccaggccgtgtgccgcgtgtaccgctacggtcagaccaag
ccgtgccacatctacaggctggtgacagacaagtcactggagaagaaaatatacgacaga
caggtcaacaagcagggcatgtcagatcgagttgtagacgagttacaaccagaatccaac
ttcacaaggaaggaagtggaagacctctttagttatgatgattcagacccagtgtatgaa
gacttctcccaggatgcagctcagtttgcagactccatcctccaggacatctgtacagaa
cacagcaaactcatcaccaaggcaccatttcaacatgagtccctcctgatcgacaggaag
gatcacaaactcacaaaggcggagaagagagcagctaagaagggctacgagcaggagaag
cgcatgagcgtcagtaactactcccgaccatcctactccgccttctatccccagcaacag
tcaggggggacacctggcagctcagggggaactgcatccatatccagcctcatatcattt
gctagggcacagacaggaatgcctccgatgatccaccgtcccgtggcgaatgtacggccc
atccagtccacgcccatcccgatgcagcctcggacatccggcagcaacgatgtccaggtc
tttcaacgagggggacacaacatcatggtcaaccacgtcaagaccaccatggacatcccg
atccccggcagtgccagttccacctcttctgcacagaagatccctgccggcacacagatc
accgtgatccgcacgcaccgcggcatgtacatacgcaccaacgacggcaagatcttcgct
gtgcgggccggagcaccaggtatgagccaggttctccgtgggtctctcggttctgcccag
agtaactccggcagccaaggtatccctgtccaggctggtgggccatccttgtctgccact
gcggtgaacgaggccattggctctgctgcagcctcctccgccacctccggtcagcctttc
ccccggccagcggcaacgtcagcaccaatggtcagtgccctgctctccggcacgccctct
cgggagtcgccagggctcggacgtgtgatgccgatgacatcggtcacaacaagcacatca
acgtctggcaataacacggcaagttcatcagaagcaacagcaacaaggcaagggtatagc
agtgcgtctaccgccgaggtctctccgtttctcaccacatcgagtagagaaccagatggt
aaacaagatgggaacagtagcgaagctgacaagagcatggctcagagaccggagtcgacg
ggagggcttagctcgggaagctcgcagtctcgtcctgcgagtcagaacctggagagaacg
tcgcccatctcacaggcggctgacagtagcgtgccggccgttacatcgtcaggcgttcca
ccctccgtcgcgcccctagtctcccagcagaacaccacacagagcatggggttgcccaac
ttctccttccccacccctagccagggccaggctctgaacatgaacattccaggcatgggg
aacatctccccctcccccttacagaacctcatgacctttgtccccagctacctcaaccca
ggctctgcccagccccagcctggtatgatccccagcatgtacaactaccccggcatgatg
ccaccgttcggcctggtggcagcacccctgcccttccttccatctgccccaccccccaac
atgcaggcaacacttggcaatgctgttccactcagcgggtaccctccccagcctggtatg
gctattccaactaccaccaccacctctcaggagccagctaaaagtactgaggagatgagt
tcatcaccgttcaacttagatgacattgtccagctggactga
DBGET
integrated database retrieval system
