Branchiostoma floridae (Florida lancelet): 118417414
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Entry
118417414 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118417414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfo02000
]
118417414
Transporters [BR:
bfo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118417414
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_22
AAA_23
AAA_29
MukB
Motif
Other DBs
NCBI-GeneID:
118417414
NCBI-ProteinID:
XP_035678866
UniProt:
A0A9J7LA82
LinkDB
All DBs
Position
6:complement(1588214..1634853)
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AA seq
2032 aa
AA seq
DB search
MGLRGRQFLLLLWKNIKLQIRRPIGTFIEIFVPIALFALLIIARRGLEAVDHCFSTYEPG
FEAAQTTNVQDGGAMNLSQLAAMAAMAGSMPNQVAYFPRNNLTSQLMNQITGQIQKQAST
VEFASEFDMARTVAEEQTTYYGAIVFYIDQNATALPKDVHYAIRLPHDIAGNRKTWVTER
TYPTFSRPGPRQTGDNANYKARFLVLQAAVDTVLIRHQAAANGSAGALQDVEIQLQQFPY
PKWREDTFLQTISFLLPFIQTLAFIYTAGMMVKELVYEKETRLKESMKMMGLANWVHWLA
WFLKNLLFLLLTVVPIALVLKFARILEHSNVSLLLVFWLLWVLASISWCFMVSTFFSRAK
VALLFSLVLWYLNYMPYQFIVSSYVFVPSPGCPAVQPGSVFLSHLQVALLFSLVLWYLNY
MPYQFIVSSYVFVPSPGCSAVQPMFLSHPQVALLFSLVLWYLNYMPYQFIVSSYVFVPSP
GCPAVQPTFLSHPQVALLFSLVLWYLNYMPYQFIANSYEDMTGPQKTAACLLSNTCASIG
FRLIIYYEEATIGATWANFRTTPSVDDNFSLSMAFAMLVVDTVVYLVITWYIEAVFPGKY
GVPKPPYFLFQRSYWCGPSNRVKHGEKTEKKGPSECHDNHVAYEQSQDLEMEAANNLSTM
DSPHEPEPQGLPLGISIRNLGKVFKGSTGRKVAVDGLSLNMYQGQITSLLGHNGAGKTTT
MSILTGLFPPTSGTATVNNHSILTNMDEIRSSLGLCPQHNVLFDRLTVREHLYFAITLKG
KTGDEAKREIAQMLQDLQLENKSGTVSSQLSGGMKRKLSCSMALIGGSQVVILDEPTAGM
DPYARRATWDLLLKYKENRTMLLTTHYMDEADLLGDRIAIMANGKLTCSGSSLFLKNRFG
VGYHLTLAKAPVCVEQKVRDEVEKHVPSALFGGSVGSEMAFILPTESTSLFAPLFRELEL
NRELFGITSFGVSVTTLEEVFMKTGEGTLDDIGSLTNLQASSNGQANGTATNDTESVEET
LLAANGAERAVPPSSHSAINMVDQSVYQYRDSGDLVKGCALKWQQFKAMILKRFLSAKRD
KKALITQLILPLLFVLLGLLVSITFPARSSDPARVLNFANASANEQTTGLFADLRTQNGT
GSLFQHLSTYLSQYNMQGSDVTSTVNSIMSNNEGNSVQGTALTNTAQCCGYPNLVLNSQC
ADTLYADSVTANASSSYNGKCVNEEDFGYYHCYSCMLEMAPTSTCPIGVNSSFLTDTTLY
YQEHFPDGHHHVLPGARVNSSFLTDATMYYQEHVLQTSDSASYFRSTIAGFTLSSNPDNE
SQTLARAWYSDQGYHFSAVSLNALSNILLQFYTGTDHSIEATNYPLPNSAENLAENAERG
GAGVSLAILMVYGMAFLAASFVPFVVNERQCKAKHIQFVSGLDPVTYWVATFVWDMINYL
VPWLCLVIMFAAFNTDDFGGENLGTVVTILLLYGWAALPFTYMVGFMFDSPLTAYSLITF
LLSMVTLGSIIAVFILGSVTGDEDIAEILNFVFLLLPTHALGKGFIDLSTNSQLRDQCTS
SDFNKQACEASNVTYYENNFEWNTPGVGQSVAYLAGEGLVYFLITLLIEFKFFTSLCFKE
AAKDGGSEGKVEDEDVAEERKTVLNMDPKTGNSAVVIRNLGKMYGMRKCKKATRPAVSDL
CLSIPAGQCFGLLGVNGAGKTTTFNMLTGDLTPTTGTAFLDGLNIQTHQREVRQRMGYCP
QFDALLERMTARELLTMYASLRGIPSNRTKGVVDATIEHLNLREYADKLCGTYSGGNKRK
LSTASAIVGDPPIIFLDEPTAGMDPKARRFLWDAVTSLMKGGRCIVLXSHSMEECEALCT
RLAIMVNGEFKCLGSIQHLKSRFGKGYTLMVKVDVEIHSPEPLKSFVQSQFPGAELVDEH
QGMLQYQLSSTGGLTWSSVFEALEGKRTDLGIVDYSVSQTSLEQVFLNFAKDQFSEDEPN
GKVTAPPPYSASVPNTSFSSMKSPAHHQQPIITKGVHHNAGFTDDSENITPL
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggggctccggggaaggcagttcctgctgctgctgtggaagaatattaagctacagatc
aggagacccatcggtaccttcatcgagatatttgttccaattgctttgtttgctctactg
atcattgcaaggagaggactggaagctgtagaccactgcttctctacatatgagccagga
tttgaggctgcccagaccaccaatgtgcaggatgggggggccatgaacctgtcccagctg
gctgccatggctgccatggccggcagtatgcctaaccaggtggcctacttccccaggaac
aacctgacatcacagctgatgaaccagataacaggacagatccagaagcaggcctctacg
gtcgagtttgcctcggagttcgacatggcgcggaccgtcgctgaggagcagacaacgtac
tacggagcgatcgtgttctacatcgatcagaacgccacagccctgcccaaggacgtgcac
tacgccattcgtctccctcacgacatcgcgggaaatcgcaagacctgggtgacggagaga
acctacccgacattctccaggccggggccacgccagacaggggataatgcgaactacaag
gccaggttcctggtgctgcaggctgcagtggacacggtgctgatccgacatcaggccgca
gctaacggttctgctggagccctgcaggacgtggagatacaactgcagcaattcccgtac
ccgaagtggcgcgaggacacgttcctgcagaccatcagcttcctgctgcctttcatccag
actctggccttcatctacaccgcaggcatgatggtcaaggagcttgtgtacgagaaggag
acgcgtctgaaggaaagcatgaagatgatggggctggccaactgggtgcactggctggcc
tggttcctgaagaacctgctgttcctgctgctcaccgtggtccccatcgccctggtgctg
aagttcgcccgcatcctcgagcacagcaacgtctcgctcctgctcgtcttctggctgctt
tgggtcctcgcctccatctcatggtgcttcatggtctcgacattcttctctcgagcaaag
gttgcgctgctgttcagcctggttctgtggtacctgaactacatgccttaccagttcatt
gtcagctcctacgtttttgtcccatccccaggttgccctgctgttcagcctggttctgtg
tttttgtcccatctccaggtggccctgctgttcagcctggttctgtggtacctgaactac
atgccttaccagttcattgtcagctcctacgtttttgtcccatccccaggttgctctgct
gttcagcctatgtttttgtcccatccccaggttgcgctgctgttcagcctagtgctgtgg
tacctgaactacatgccttaccagttcattgtcagctcctacgtttttgtcccatcccca
ggttgccctgctgttcagcctacgtttttgtcccatccccaggttgcgctgctgttcagc
ctagtgctgtggtacctgaattacatgccgtaccagttcatcgctaactcctacgaggac
atgacgggcccgcagaagaccgccgcctgcctcctctccaacacctgcgcctccatcggc
ttccgactcatcatctactacgaggaggcgacaatcggcgccacctgggccaacttccgt
accacgccgtccgtggatgacaatttctccctctccatggcatttgccatgctggtggtg
gacacggttgtgtacctggtcatcacctggtacatcgaggcggtgttccccggaaagtat
ggcgtccccaaaccgccatacttcctgttccagcggtcgtactggtgcgggcccagcaac
agggtcaagcatggggagaagacagagaagaaaggcccttcagaatgtcatgacaaccat
gttgcttatgaacagagtcaggatctggagatggaagctgcgaacaacctgagcaccatg
gactccccccacgagccagagccccagggcctgccgctgggcatctccatcaggaacctg
ggcaaggtgttcaagggctcgacggggaggaaggtggctgtggacgggctgtcactcaac
atgtaccagggccagatcacctctctgctggggcataacggcgctggtaagaccacgacc
atgtccatcctgaccggcctgttcccccccacctctggtacggcgactgtgaacaaccac
agtatcctgactaacatggacgagatccgcagtagtctggggctctgtcctcagcacaac
gtcctgttcgacaggctcactgtcagggaacatctctactttgccatcactctgaaaggt
aagacaggtgatgaagctaagagggagatcgcccagatgctgcaggacctccagctggag
aacaagtctgggaccgtctcctctcagctgtcgggagggatgaagaggaaactgtcctgc
tccatggctctgatcggcggttcccaggtggttatccttgacgagcccacggccggtatg
gacccgtacgcacggcgcgccacctgggatctcctgctaaagtacaaagagaaccggacc
atgctgctgaccacccactacatggacgaggccgaccttctgggggacaggatcgccatc
atggccaacgggaaactcacctgcagcggcagctcgctcttcctcaagaacaggtttggt
gttggttaccacctgacgctggcgaaggcgccggtctgtgtggagcagaaggtgagagac
gaggtggagaagcatgttccgtcggcgctgtttggcgggagcgtggggtccgagatggcg
ttcatcctccccacggaaagcaccagcctctttgccccgctcttccgcgagcttgagctc
aacagggagctctttggcatcaccagctttggcgtttccgtgacaaccctggaggaggtc
ttcatgaagactggtgaggggaccctggacgacatcggaagcctcaccaacctccaagcc
agcagcaacggtcaggccaacgggacagcgaccaacgacacagagagtgtcgaggaaact
ctgctggcagccaacggcgcagagagagccgttccaccctcctcccacagcgcgatcaac
atggtggaccagtctgtgtaccagtacagggatagcggagacctggtgaaggggtgcgcc
ctgaagtggcagcagttcaaggccatgatactgaagcgtttcctgagtgcgaagcgagac
aagaaggctctgatcacccagctgatcctgcctctgctcttcgtgctcctcggcctgtta
gtcagcatcacgtttcccgcccgctccagcgaccccgcccgtgtgctcaacttcgccaac
gccagtgccaacgagcaaaccacagggctgtttgctgatctgaggacacagaacggcacg
ggaagcttgtttcagcatttgtccacatacctgtcccagtacaacatgcaaggaagcgac
gtgacgtccaccgtcaattccatcatgtcaaacaacgagggaaacagcgtacagggaaca
gcgttgaccaacaccgcccaatgctgcggctaccccaacctggtcctaaactcccagtgt
gcggacaccctgtatgccgactccgtcacagccaatgcttcatcgtcctataacgggaag
tgtgtcaacgaggaagactttggttactaccactgttactcctgcatgctggagatggca
cccaccagtacctgtcccataggagtgaactccagcttcctgacagacaccaccctgtac
taccaggagcattttcctgacggacaccaccatgtactaccaggagcacgagtgaactcc
agcttcctgacagacgccaccatgtactaccaggagcacgtcctccagaccagcgactca
gcctcctacttccgcagtaccatcgcaggcttcactctctcctcaaaccctgacaatgag
agccagacccttgccagagcatggtacagtgaccaggggtaccatttctctgccgtgtcg
ctaaatgcactgagcaacatcctgctgcagttctacaccggtactgaccacagcatcgag
gccaccaactacccgctgcccaacagtgcagagaacttggcagagaacgctgaaagaggc
ggagccggcgtcagtctggccatcctcatggtgtacggcatggccttcctcgccgcaagc
tttgtgccattcgtcgtgaacgagaggcaatgtaaggccaagcacatacagtttgtgagt
ggactggaccctgtgacgtactgggtggccacgtttgtgtgggacatgatcaactacctg
gtgccgtggctctgcctggtcatcatgttcgctgccttcaacacagacgacttcggggga
gagaacctcggcactgtggttaccatactgttgctgtatggttgggcggccctgcccttt
acctacatggtggggttcatgttcgactcaccactgacggcctactccctgatcaccttc
ctgctgtccatggtcacactgggatccatcatcgcagttttcatcctgggcagcgtcacc
ggcgacgaggacatcgcagaaatcctcaactttgtgttcctgctgctgccgacccacgca
ctgggtaagggttttatagacctatccaccaacagccagctacgtgaccagtgcacctcc
agtgactttaacaagcaggcctgcgaggcctccaacgtcacatactacgagaacaacttc
gagtggaacacgcctggcgtggggcagtccgtggcgtacctggcaggggaggggctcgtg
tacttcctgatcacactgctgatagagttcaagttcttcacctcgctctgcttcaaggag
gcggcaaaggatggagggagtgagggaaaggtggaggatgaggacgtggctgaggagcgc
aagacagtgctgaacatggaccctaagacagggaactctgcggtggtgatccgtaacctg
gggaagatgtacggcatgaggaagtgtaagaaggcgacacgccccgccgtgagcgacctg
tgcctctccatccccgcgggacagtgcttcgggctgctcggggttaatggggccgggaag
accaccactttcaacatgctgacaggtgacctcacccccaccactggtaccgcattcttg
gacggcctgaacatccagacccaccagagggaggtacgtcagagaatggggtactgcccc
cagttcgacgcccttctggagagaatgactgcccgtgagctgctaaccatgtacgccagc
ttgcgaggaatcccgtccaaccgtaccaaaggcgtggtagatgccaccatcgagcacctc
aacctgagggagtatgccgacaagctgtgtgggacttacagcggtggaaacaagaggaag
ctgagtacagcatcagccatcgtgggagatccacccatcatcttcctggacgaacccacg
gcgggcatggacccgaaggcccgacggttcctgtgggacgcggtgacgtcactgatgaag
ggcggccgctgcatcgtgctgncctcccacagcatggaggagtgtgaggctctctgtacg
cgcctggccatcatggtcaacggggagttcaagtgcctgggcagcatccagcacctcaag
agcaggttcggtaaaggctacaccctgatggtgaaggtggatgtggagatccactccccc
gaaccgctcaagagcttcgtacagtcccagtttcctggagcagaactggtggatgaacat
cagggtatgctgcagtaccaactgagtagcacagggggcctcacatggtcatctgtgttt
gaggcccttgagggaaagcggacagacctgggaatcgtggactacagtgtctcacagacc
agcctggagcaggtgtttcttaactttgccaaggaccagtttagcgaagacgagccgaac
ggaaaggtgaccgccccaccgccatacagcgcctccgtacccaacacttccttctccagc
atgaagtcccctgcacaccaccagcagcccatcatcactaagggggtccaccataacgca
gggttcactgacgactcggaaaacatcactcccttgtag
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integrated database retrieval system
