Branchiostoma floridae (Florida lancelet): 118423747
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Entry
118423747 CDS
T01074
Name
(RefSeq) serine/arginine repetitive matrix protein 2-like isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03440
Homologous recombination
bfo03460
Fanconi anemia pathway
bfo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118423747
09124 Replication and repair
03440 Homologous recombination
118423747
03460 Fanconi anemia pathway
118423747
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118423747
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118423747
03036 Chromosome and associated proteins [BR:
bfo03036
]
118423747
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118423747
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118423747
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118423747
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118423747
Multi subunit Ring-finger type E3
BRCC complex
118423747
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118423747
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
118423747
BRCA1-A complex
118423747
BRCA1-B complex
118423747
BRCA1-C complex
118423747
BRCA complex
118423747
FA (Fanconi anemia) pathway
Downstream FA components
118423747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
RTT107_BRCT_5
zf-RING_2
zf-Nse
zf-C3HC4_3
zf-RING_5
zf-RING_10
zf-RING_6
zf-rbx1
PTCB-BRCT
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
118423747
NCBI-ProteinID:
XP_035687844
UniProt:
A0A9J7N2Y3
LinkDB
All DBs
Position
10:7354361..7400711
Genome browser
AA seq
2825 aa
AA seq
DB search
MMESVSSTTGTELTRVQHILGLMQKNLECPICLDLLKNPVSTRCDHQFCRFCILKALTGK
QSVSCPLCKVEVTKRSLQDNTQLQQIITAVQSVTEAVYKDTDQQKAPPVGSSQNYSKSQD
QKEQGEKRRHISTDSEEGNGVPSTVQVRNRRNIRQAKKRKVEETPVYIEEDPIDDHSAPR
TTTNINISHGFPVQELSKGRKNRNLNNPPNREAHRRSAPRRTRHAPRRDGRSSNREQGSG
HLEPTVTSAELLSALVENSLGVSGDGHVTNGCHGDDDVTGNADPSAEDGRLLHVLGEASL
GLFEQSGAKDIQESTTVLNSGGKVPTIEEHKEDQVGEKPLLTSHDHNDGSHADQEPHGDD
QKSDTLGPTISEAEPLDISKDQEQMAVDLLTTEVEDEVPADIGKEVKAQEKVEFWLKHHN
TTATEPGGTEDLDPYEFIGSQQDHAKGKKKSRKRGKKGRKPPAADNRNKKSPKSSSGPSK
GKPTKTSAKKVEEVEDVEVDCEDLDQEEGEASAASMTDCSEASWKPGQSDPDWGKGRSSR
RKSAETNADKESVSSKGRKRKQRNPADREDQMTVSSGSSSQLRIDRWVQRKEKLFVKSYS
KPASSRREKTLLHKKKAAGLEEQWRRAKDMAGDFSAKVLHPIAEELPSKTKKKSKDNHTT
SKASTKETCSATGLHPLQDLPSLGEREEVLNSEDDMCVYLTSNGELLNSPEKSDNPSDDD
QDQEKQPTKEKSVALTEQEQKIAADLNELDEQTLSQLGMFSQQYLQKRKRRKDRKKRLEE
VQNEDEDNIFAAIRALESESNLCNKEHQTQDETSRKEDNCTEVVDAGDVISAPVDEEVKK
DNNSRKSRQARSLSRDRRGQGDVTEEKEARPRRTRSSSRKSAEDVLVDVGNAVSDRSSRQ
AGSSSKTKTNVRKNQNDKEDGETNGEEQSRPDCMKDECEHIPQDAGTSDKDKLAKKQKEE
TERQQTAKEEKTSEKELETRQEGSVNIEETAMKENATSPKALQMRKRHAAEKQTNKKALG
NMGESLGVRQTRRNKKMPETVKEAEPPKHLPLVTTKDTVPQDPYQFQYSQESNRKKAGKK
KGRRQRGKVKKLKRTKARKRELLLIQTGWIEREEAGEDEDSEEENGQENVEDQTVDELNV
DESRDAQAHLDKQEERDQDTKVLGEEKDNTEVSVIPESNPNTEPISSSVKNKKHDVDLTA
CQPSCSLEETPGIYSTDIIPPSVEGTQIMSPQAGKKKRKTSLNKKKTEEDTSQRETGEDT
KLSKSGKVSSPETENSEDIIQPSWQDLLKQTKDKISNKPENMKESERAQDENIRRSPRRC
SKNASANRKGKDQDIKQPRMNSPEKDKDGPQDVLSSPRRRPKKPLEEQDIRRSPRHSTHK
PLAGAVNAEQDAIVNSRHHPEQDEKQNTSRTTEHSPEKALDKEDKEMIRSPRRRTEKVMN
EDKNKTGKGNLHPGNKEKRNILQDFGNVVRNIPDTITLASPSPPRRNFAGVASNTRSHKR
GEGCILDSRNDEEILSLPASQDRSLENSMEDCGVILESETTTEFDGKLVEVVADVHRLAE
FSEGSQQSQRQNKLRKAASDIQSPGRHASGRTPASLRSSGRDSTPGEVPPTPPPPSTPPV
LPATISTSGQKAAKDRNRLSIQRRSSQLSSPENTPSICSNSQENTPSTPGVQKSLPTSTK
SQPKSSATPPDAVDNEKDTPKSCPPESEVSTVCSQVSTPEVDTDSDVVPDTEENPTKKGK
RKSSNLQKASDSEATPRTKVTSPSMMFQQSFPDSGNTEASVSLLENVKPRGAETVSQQKR
KSPRLSRGVSDSGKQERKCSDEPKETVTQKLEQSEAEQTNSKRHLKEQRGKEEVKTDNLK
PTEKVVGKQASFEGLIQQSNEIEHYDVTDDDKEDLQMEDIEEEDGQEEEDAVEDEDDSEE
DDLVPPTPPDTSFTQLTQRTKTVKSKTWTPERVTREDLKENNFQPVILEEEEDRECNWSD
DDNDELPDLDEEPEHQVSSTGHSNTATPQNGGRNKAEEQPDAKEGFKENQKDTDINTRSQ
SKRRKAASGEIEAKDEATDESMPKRRKSDIDSEWKEERIPKVDVVNVTAGFENNEESDLS
QDSHVHDLTNASSLSELYDTQNQDKLKNDVQNLEGQMAMIQMLLAKGKERARETGKEENT
NKDPTSIAKQHLTTVYEENMQMSEGDHEEILSGKDLYGTPSSQASAKCTYSTAQEETPRK
RRPSSTSTPQSNHSPTKEYNFRKRMLSPQRSQEASAKSRKSRQSSPRSSQPCLSPRSPSP
PPPLSPEKTRTPRVLPPAVQAAANILEKFRSPDLATKGKRRNSGNSSPLGKEDSTARRLS
PRTKKESQSPPDRKNTTPRSSSFKTSASKSPSSPRSKKYDIEKRMNLEDEVEDSMPVENL
VSTAARNRRSLNKRKRKSLQDTFADEEDETMRCDDAPSPGDHKIPTSEEPEEMSTNWKAF
QQMKCDILAQKGTSTSNGQNKEAPKRLSLPSTMKSDRCTSDKRKSEPVVSSSQFDRNSIT
NNPSTPQPRKNPLTFSQQPSPSVGNLSQTVSRRKKESPRLIGSSKSPIDRLPHGNTEKLT
STSSCSAVKSVAGPPTVVKTEWQNDNRAPMTFVTTGLSREETRAVHELAKKTGSQVKQSF
DNSTTHVITRTDVDLFCSRTLKFFLGIAGRKWIVSFQWIAACLEEGKHVPEDPYEVRGDL
VHGCHGGPRQARSNKGKLLLCDYEICIYGKFTALTRDDLQFMVELCGGTVVKEPHMFPHD
KKPLIVSQIDANQLTEEDYNVFYRRYGVLSVTRDWILDSVSSYQIQPIERYLMCSTKNQN
IIVID
NT seq
8478 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtctgtcagcagtaccacagggacagaactgaccagggttcagcacatcctg
ggtctcatgcagaaaaacctggagtgccccatatgcttagacctgttgaagaaccctgtc
tccacccgctgtgaccaccagttctgtagattctgtatcctgaaggcccttacaggaaag
cagagtgtctcctgtcctctatgtaaggtggaggtgaccaaaaggagtctgcaagacaac
actcagctacaacagatcatcacagctgtacagtcagtaacagaagctgtctacaaggac
actgatcaacaaaaagccccacctgtaggatcatcacagaactacagtaagtcgcaggat
caaaaggagcaaggggagaagaggagacacatttccacagactcagaagaaggaaatggg
gtgccatcaactgtacaggtccggaacagacgaaacatcagacaagccaagaagaggaaa
gttgaggaaactcctgtttacattgaggaagatccaattgatgatcattcagcaccaagg
acaaccacgaatattaacattagtcatggcttcccagtgcaagaactctcaaagggaaga
aaaaacaggaatttgaacaacccgccaaaccgcgaggcccatcgtaggtccgcccctcgg
agaaccaggcatgccccgagaagagacggccgctccagtaatcgtgaacagggcagcggt
catctagagccaactgtcaccagtgcagaactgttgtccgctttggtggaaaattcccta
ggtgtatcaggtgatggtcatgtgaccaatggttgccatggtgatgatgatgtcacagga
aatgccgacccctcggcagaagatggcaggctcctgcacgtgcttggggaggcctcgctt
ggactgtttgagcaaagtggagcaaaagacattcaggaatctacaacagttcttaattct
ggaggaaaagttccaacaatagaagaacataaagaagaccaggttggtgagaagcctcta
ctgacaagccatgatcacaatgatgggagtcatgctgaccaggaaccccatggagatgac
cagaagtcggacacactcggccccaccatcagcgaggcagaaccattggacattagcaag
gaccaggaacagatggccgtcgaccttctgacaacagaagttgaagatgaagttcccgca
gacatagggaaggaggtaaaggcacaggagaaggtagagttctggctgaaacaccacaac
acaactgccacagaaccagggggcacagaggacctggatccatatgagttcataggcagc
cagcaggatcatgcaaaagggaagaagaagtctaggaaaagggggaagaaaggaagaaag
cctcctgcagctgacaacaggaacaagaagtctcctaagtcttcttctggtccttctaaa
ggcaaacctacgaagacatcagctaagaaggttgaagaagtggaagatgtagaggtagac
tgtgaagacttggatcaggaagaaggggaggcctcagctgctagcatgactgactgttcg
gaggcatcatggaagcctggccagtctgacccggattgggggaagggaagaagctcgcga
cggaagtctgcagagacaaacgctgacaaagaatctgtatccagcaaaggtcgtaagagg
aagcaaagaaatcctgccgacagggaggaccagatgacagtgtcttcaggaagcagcagt
cagctgcgcatcgaccgatgggtgcagagaaaagagaaactgtttgtcaagagctacagc
aaacctgcttcgtcccggcgcgagaaaactttactccataagaagaaggctgcaggtctt
gaggaacagtggcggagagccaaggacatggccggagacttctccgccaaagtcttgcac
cctatcgccgaagaactccccagcaagactaagaagaaatctaaagacaaccacacaaca
tcaaaagcttctacaaaggaaacctgtagtgcaacaggtctacatcctttgcaggatttg
ccaagtctaggagagagagaagaagtactcaatagtgaagatgacatgtgtgtttacctc
acaagcaatggagaactcctcaacagccctgaaaagagcgacaacccaagtgatgatgat
caagatcaggaaaaacagccaaccaaggagaagtctgtagcattgacggaacaagaacag
aagatcgcagcagatctcaatgagctcgatgaacagacactcagtcagctaggcatgttc
tcacagcagtaccttcagaagaggaagagaaggaaggataggaagaagagacttgaagag
gtgcaaaatgaggatgaggacaacatcttcgcagcaatccgggctttagaaagtgagagc
aatctttgcaacaaggaacatcaaacccaagatgaaacatcaagaaaagaagataactgc
acagaagtagtggatgcaggagatgtaatttcagcaccagtggatgaagaagtgaagaag
gataacaattccagaaagtcccgacaggcaaggtctttgtcccgagatcgcagaggtcaa
ggtgatgtcacagaggaaaaagaagcaaggccaaggcggacaagatcttcttcaaggaag
agtgcagaagatgtccttgtagatgttgggaatgctgtgtccgacagaagcagtagacaa
gcaggatcttcatctaagactaagactaatgtaaggaagaatcagaatgacaaggaagat
ggtgaaacaaatggtgaagaacagtcaagaccagattgcatgaaggatgagtgtgaacat
atcccccaagatgcaggaacatctgacaaagataagcttgctaagaagcagaaggaagaa
acagaaagacagcaaactgcaaaagaagaaaagacatctgaaaaggaattggaaacaagg
caagaaggttctgtcaacattgaagaaactgccatgaaggaaaatgcaacgtcaccaaag
gctttgcagatgagaaaacgtcacgctgcagaaaaacaaactaacaagaaagctcttggc
aacatgggagaatcgcttggcgtacgacagacaagacgcaacaagaagatgcctgagacc
gtgaaggaagctgaacctccgaagcatctccctcttgtgacaacaaaagacacagttcct
caggatccttaccagtttcagtacagccaggaaagcaacagaaagaaagcaggaaagaag
aagggaaggagacaacggggtaaagtgaagaagctgaaaaggacaaaagcaaggaaaagg
gagttgctgttgatccaaacaggatggatagaaagagaagaggctggagaagatgaagat
agtgaagaggaaaatggtcaggagaatgtggaagaccaaacggttgacgagttaaatgtg
gatgaatctagggatgcccaagcacacttagacaagcaagaagaaagggaccaggataca
aaggtccttggtgaagagaaggataatacagaagtatcagttattccagagtcaaacccc
aacacagagcccatctcaagcagtgtgaagaacaaaaagcatgatgttgaccttactgcc
tgtcaaccaagttgttcattggaggaaactccaggcatctactccactgacattatccct
ccatctgtagagggcactcagataatgtctcctcaagctggcaaaaagaagaggaagacc
tccttgaataagaagaagacagaggaagacacaagtcagagggagacaggggaagacaca
aaactgtccaagtctggaaaagtttcatcgccagagacggaaaactctgaggacatcatt
caaccatcctggcaagatttactgaagcagactaaagacaaaatctccaacaaaccagaa
aatatgaaggagtctgaaagagcacaagatgaaaacataaggcggagtccaagacgctgt
tccaagaatgcctcagctaacagaaagggcaaagatcaagacataaaacagcccagaatg
aacagcccagagaaagataaggatggaccacaagatgtattaagtagcccaagacgtaga
ccaaagaaacctttggaagaacaagacataaggaggagtccacgacacagcacacataaa
cccctagctggagctgtaaatgcagaacaagatgcaatagtgaattcaaggcatcaccca
gagcaagatgaaaaacaaaatacaagcagaactacagagcacagcccagagaaagctttg
gataaagaagacaaagagatgataagaagtccaaggcgcaggactgagaaagttatgaat
gaagacaagaacaaaacaggaaagggaaatcttcatcctggcaacaaagaaaagagaaac
atactacaagactttggcaatgtggtcaggaatatccctgatacaataacattggctagc
ccctctcctccaaggagaaacttcgcaggtgtggcgagcaacacaagatcacacaagagg
ggagaagggtgcatccttgactcaagaaacgatgaggaaatcttatctttgcccgcaagc
caagacagaagtttggagaacagtatggaagactgtggtgtgatactagagtcagagact
actacagagtttgacgggaagttagtggaagtggtagctgatgttcacaggctggcagag
ttctcagaggggagccaacagtctcagagacagaacaagttaagaaaagcagcatctgac
atacagtctcctgggcggcatgccagtgggaggaccccagcatcactccgcagcagtggg
agggacagcaccccaggggaggtgccccccacccctcccccaccctccacacctcctgtc
ttaccagctactatcagcaccagcggtcaaaaagcagcaaaagacaggaacaggctgagc
atacaaaggcgaagttcgcaacttagctcgccagagaatacgccatctatctgttccaac
tctcaagagaacacaccttctactccaggtgtccagaagtcactaccaactagcaccaag
tctcagccaaagtctagtgctacgcctcctgatgcagtagacaatgaaaaggacacaccc
aagtcatgtcctccagagagtgaagtatccacagtgtgtagtcaggtatccacaccagaa
gttgacacagactcagatgtggtcccagacactgaagaaaatcccactaagaaaggaaaa
aggaaatcctcaaatttgcaaaaggcttcagattcagaagctacccccagaacgaaagtg
acatccccaagtatgatgtttcagcagtcttttccagattctggaaatacagaagctagc
gtctctctccttgagaatgtgaaaccaaggggtgcagaaacagtttcacaacagaagaga
aaaagtcctcgactcagtagaggggtatcggacagtggcaaacaggagaggaaatgcagc
gacgaaccgaaagagacagttacacagaaactggagcaaagcgaagctgaacagaccaac
tcaaaacgtcatcttaaagaacaaagaggaaaggaagaagttaaaactgacaacttgaag
cctactgagaaagtggtaggaaaacaagctagctttgaaggactaattcagcaatccaat
gaaattgaacactacgatgttacagatgatgataaggaagaccttcagatggaagacatt
gaagaggaagatggacaagaggaagaggatgctgtagaagatgaagatgacagtgaggag
gatgatcttgtccctccaactcctccagacacctccttcacacaactgacccagagaacc
aagactgtgaagtctaaaacttggacaccagaaagggttacaagggaagacctgaaagaa
aacaactttcaacctgtcatattagaagaagaggaagatcgtgagtgtaactggtcggat
gatgacaatgatgaactgcctgaccttgacgaggaaccagagcatcaggtgtcatccaca
ggtcattccaacacagcaactccacagaatggcggaagaaacaaggcagaggaacaacca
gatgcgaaagaaggcttcaaggaaaaccaaaaagacactgacattaatactcgttctcag
agtaagagaaggaaagcagcaagtggagaaattgaagcgaaagacgaagcaactgacgaa
tcaatgcccaaaaggagaaagtcagatattgactcagagtggaaagaggaaaggatccct
aaagttgatgttgtcaacgtcacagccggctttgagaataatgaagagtctgacctgagc
caggacagccacgtccatgacctgaccaatgcttcatccttgagtgagctgtatgataca
cagaaccaagacaagttaaagaacgatgtgcagaacctggagggacagatggccatgata
cagatgctcctggccaaggggaaggagagagcgagagagactggaaaagaagagaacacc
aacaaagatccaacctccatcgctaagcagcatctcacaacagtgtatgaagaaaacatg
cagatgtcagagggtgatcatgaggaaattctaagtgggaaggacttgtatggcacccct
tcctcacaagcatctgcaaagtgcacatactccacagcacaagaggagactcctagaaaa
cggaggcccagtagcaccagcacacctcaatctaatcactcacctaccaaggagtacaac
ttccgcaagagaatgttgtcccctcaaagatcgcaggaggcgtctgcaaagtcacgaaaa
tctcggcaaagttcgccaaggtcgtcccaaccttgcttgtcgccacgctcgccctccccg
cctccgccgctttctccggagaagacgagaactccgagagtgctcccgcctgcagttcag
gccgcagcaaacattcttgagaagttcaggagcccagaccttgcaaccaaaggaaaaaga
aggaatagcggtaacagtagcccactgggaaaagaagacagtacagcaagaaggctaagt
cctagaacaaagaaagaaagtcaaagtcctcctgataggaagaacactaccccaagaagc
agcagttttaagacgtctgcttcaaagagcccttctagtccaaggagtaagaaatatgac
attgagaaaagaatgaatcttgaagatgaagtggaagacagcatgccggttgagaacttg
gtttcgactgctgccaggaacaggagaagtcttaacaagagaaagaggaagtctttacag
gacacgtttgcagatgaagaggatgaaactatgaggtgtgatgatgcaccatctcctggt
gaccacaagataccaacttctgaagaaccagaggagatgtcaaccaactggaaagcattt
cagcaaatgaaatgtgatattctggcccagaaaggcacgtctacaagtaatgggcaaaac
aaggaggctcccaaaagactgtctctgccttcaacaatgaaatcagacagatgtacttca
gacaaacgaaaatcagagccagtcgtttcttcctctcagtttgatagaaacagcatcaca
aacaacccttctactccacaaccgaggaagaacccactaacgtttagccagcagccctca
ccaagtgtgggaaacctgtctcaaactgtttctagaaggaagaaagagagtccacgcctg
attggcagtagcaaatcacccattgatcgcttaccccatgggaacactgagaagttgact
tccacatcaagttgtagtgctgtgaagagtgtagcaggacctcccacagtggtgaagact
gagtggcagaatgacaaccgtgctcccatgacatttgtgacaacaggactgagtagagaa
gagacacgagcagtgcatgaactggccaaaaagacagggtctcaagtcaagcagtcattt
gacaacagcaccactcatgtcatcaccagaacagatgtggacctgttctgttcccgtacc
ctgaagttcttcttgggcattgcaggcagaaaatggattgtctcctttcagtggattgct
gcctgcttagaggaaggaaaacatgtgccagaggatccgtatgaagtccgaggagacctg
gtccatggttgccatggcggcccacgacaagctcgcagcaataagggcaagcttctcttg
tgtgattatgagatctgcatctatgggaagtttactgctctcaccagagatgacctgcag
ttcatggttgagctgtgtgggggcactgttgttaaggaacctcatatgtttcctcatgat
aagaaacccttaatcgtgagccagatagatgccaaccagctcacagaggaagactacaat
gtgttttaccgacgttacggagtcttgtccgtgacaagggactggattctggacagcgta
tcaagttaccagatccaaccaatcgaacgctacctgatgtgttcaacaaagaaccagaac
atcatcgtcatcgactga
DBGET
integrated database retrieval system
