Branchiostoma floridae (Florida lancelet): 118425981
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Entry
118425981 CDS
T01074
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
3.6.4.13
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118425981
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
90S particles
Helicases
118425981
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Herpes_ori_bp
AAA_19
Motif
Other DBs
NCBI-GeneID:
118425981
NCBI-ProteinID:
XP_035691066
UniProt:
A0A9J7N685
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All DBs
Position
11:complement(9723367..9741530)
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AA seq
698 aa
AA seq
DB search
MAAPEELQLFRKLGIGAKFDTKRFRKDAERSQMIRAQVTPTVSKEEADKALDFFGNLSKQ
KPSKPAAESTGDNVARTSAETSSKNNCSEVLKSDGLRVQSKKGKKRKQKGELADSDDSDY
SEDSLQLLGDIKASEKKKKKRKKKDLTVNKVEQIKQEKLSEFRRKNRIHVQGSDIPAPVT
SFQELQGVYGIHPQILTNLQGLGYEEPTPIQMQAIPLMLQRREILACAPTGSGKTAAFIL
PILHHLREPRRQGFRAVVVSPTRELAKQTFTWFQRLGEGRGFRTYYIEKPAQAAKKFGPN
SAKKFDILVTTPNRLVYMLKQDPPIVSLHSVEWLVVDESDKLFEEGKQGFRDQLGVIYQA
CDSSHVRRAMFSATFAYDVEQWCKVNLDNVVTVSIGARNSAVDTVEQQLLFVGSESGKLL
AMRELVRKGLTPPVLIFVQSKERAKELFHELIYDGINVDVIHADRTQTQRDNTVKCFRTG
KIWVLICTELMGRGIDFKGVNLVINYDFPTSAVSYIHRIGRTGRAGRPGKALTFFTEDDI
VHLRSIANVMREAGCEVPEYMLELKKANRKERRFLEKRAPKRKSISTTPKMFVDKAMKKR
KMIEKSKKMQGKTRKHEAVQSDSSTANADDRNTVTESGGNRKNNEQETGKHKGEKLQGKK
CATSIDRSAKLLSVNTNGKGPRKRMKKRKGANQNVAKS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccggaggagctgcaacttttccgcaagctcggaattggggcaaaattcgac
acgaaacgcttcaggaaagacgctgaacgttctcagatgattagagctcaagtcacacca
acagtatccaaagaagaggcagacaaagctctggatttctttggtaacttatcaaaacag
aagcccagtaaaccagcagcagagagtactggagacaatgtggcaaggaccagtgcagag
acatcaagcaaaaacaactgttcagaagtattgaagagtgacggcctcagagtacaatca
aagaaagggaagaaaagaaaacagaaaggagaactagccgacagtgacgacagtgattac
agtgaagacagcttacagttgctcggtgacatcaaagcttcagagaaaaagaagaagaaa
aggaaaaagaaagacctgacagtgaacaaggtggagcagatcaaacaagaaaagctgagt
gagtttcgacgtaagaatcggatccacgtacagggctcggacatccccgcccccgtcacc
agtttccaggagctacagggggtgtacggtatccacccccaaatcctcaccaacctacag
ggcctggggtatgaggaacctacacccatccagatgcaggctataccactcatgttacag
aggagagaaattctggcctgcgcaccgacgggttccggtaagacagcagccttcatctta
cccatcctgcaccacctgcgagaaccgcgccgacagggcttcagggccgtggtcgtgtct
ccaaccagggagctcgcaaaacagacgtttacatggttccagaggctgggagaggggcgt
ggcttcaggacgtactacatagagaaacctgcgcaggctgccaagaagtttggacccaac
tctgcaaagaagtttgatattttggtgacaactccaaacagactggtgtacatgctgaaa
caagatcctcccatcgtatcattacacagtgtggagtggctagtagtggacgagtcggac
aaactgtttgaggagggaaagcagggtttccgagatcagctgggagtcatctaccaggcc
tgcgactcctcccacgtgcgtagggccatgttcagcgcaacgttcgcgtacgatgtggag
cagtggtgcaaggtgaacctggacaacgtggtgacagttagcattggagcaaggaactca
gctgtggatacagttgaacaacagttgctgtttgttgggtctgaatctggcaaattgctg
gccatgagagagcttgtcagaaaagggctgacccctccagtgctgatctttgttcagtcc
aaggaacgagccaaggagctgttccatgagctcatctatgatggtatcaatgtggatgtg
atccatgcggacaggactcagactcagagagataacactgtgaagtgtttccggacaggg
aagatctgggttctaatctgtactgagctgatgggaagaggcattgacttcaaaggtgtc
aacctggtcatcaactatgactttcctaccagcgctgtcagctacatccacagaataggc
cggactggaagagctgggagacctggcaaagccttgaccttcttcaccgaggatgacatt
gttcatctgagaagcatagccaatgtgatgagggaagcaggctgcgaagttcctgagtac
atgctggaactcaagaaagcaaacaggaaggagagaaggtttctggagaagagagcaccc
aaacggaaaagtatcagcactacaccaaagatgtttgtggacaaagctatgaagaaaagg
aaaatgattgagaagagcaagaaaatgcaagggaagaccaggaaacacgaagctgtgcag
tctgatagctcaacagcaaatgcagatgaccggaatacggtcacagaatctggtggaaac
aggaagaacaatgagcaagaaactggaaagcacaaaggagagaaactccaagggaagaaa
tgtgcaaccagtatagacagaagtgcaaaattgttgtcagtaaatacaaatggtaaaggt
ccgaggaaaagaatgaagaaaaggaaaggagccaaccagaatgttgccaagtcgtaa
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