Bacteroides fragilis YCH46: BF0950
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Entry
BF0950 CDS
T00202
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF0950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfr03021
]
BF0950
Transcription machinery [BR:
bfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF0950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_23
UPF0122
HTH_11
HTH_Tnp_4
HTH_36
TnsD
HTH_40
HTH_28
HTH_16
HTH_38
HU-CCDC81_euk_2
HTH_10
HTH_Tnp_ISL3
HTH_DeoR
HTH_Mga
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BAD47700
UniProt:
Q64XS6
LinkDB
All DBs
Position
1146395..1146970
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AA seq
191 aa
AA seq
DB search
MFAHHTDRFMTEKELIVSLKQGDEAAFTALYRMYWPKVHNFSRLYLSSIAEVEEVVQEVF
VKLWEARIFLKEDESFKGFLFIITRNIIFNQFRKSFNENAYKTTVLSSAEVEYDIENEMD
AADLQGYIKKLISELTPRQQEVFHLSREEHLSYKEIAIRLSISEKTVERHINEALKFLRK
NIYLFFIFLSL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacatcacaccgatagatttatgaccgagaaagagcttattgtatcattaaaa
cagggggacgaagctgcatttactgctctatacagaatgtattggcctaaagttcacaac
ttttcccgtttatacctatcttctatagccgaagtagaagaagtggtacaggaagttttc
gtaaaattgtgggaggcacgtatctttctgaaagaggatgaaagtttcaaaggattcttg
tttattataacccgaaatatcatttttaatcaatttcgtaaaagttttaatgagaatgcc
tataaaacgactgtacttagtagtgcagaggtagagtatgacattgaaaacgagatggat
gcagctgatcttcaaggctatatcaaaaaattaatttcagaactgacaccacgacaacaa
gaagtatttcatttaagtcgtgaggaacatctcagttataaagaaatagctattcgatta
tctatcagtgaaaaaacagtagagcgtcatattaatgaagccttaaaatttttacgtaag
aacatctatttattttttatatttctttctctataa
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