KEGG   Bacteroides fragilis YCH46: BF0950
Entry
BF0950            CDS       T00202                                 
Name
(GenBank) RNA polymerase ECF-type sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfr  Bacteroides fragilis YCH46
Pathway
bfr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bfr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BF0950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfr03021]
    BF0950
Transcription machinery [BR:bfr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BF0950
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_24 HTH_23 UPF0122 HTH_11 HTH_Tnp_4 HTH_36 TnsD HTH_40 HTH_28 HTH_16 HTH_38 HU-CCDC81_euk_2 HTH_10 HTH_Tnp_ISL3 HTH_DeoR HTH_Mga Xre-like-HTH
Other DBs
NCBI-ProteinID: BAD47700
UniProt: Q64XS6
LinkDB
Position
1146395..1146970
AA seq 191 aa
MFAHHTDRFMTEKELIVSLKQGDEAAFTALYRMYWPKVHNFSRLYLSSIAEVEEVVQEVF
VKLWEARIFLKEDESFKGFLFIITRNIIFNQFRKSFNENAYKTTVLSSAEVEYDIENEMD
AADLQGYIKKLISELTPRQQEVFHLSREEHLSYKEIAIRLSISEKTVERHINEALKFLRK
NIYLFFIFLSL
NT seq 576 nt   +upstreamnt  +downstreamnt
atgtttgcacatcacaccgatagatttatgaccgagaaagagcttattgtatcattaaaa
cagggggacgaagctgcatttactgctctatacagaatgtattggcctaaagttcacaac
ttttcccgtttatacctatcttctatagccgaagtagaagaagtggtacaggaagttttc
gtaaaattgtgggaggcacgtatctttctgaaagaggatgaaagtttcaaaggattcttg
tttattataacccgaaatatcatttttaatcaatttcgtaaaagttttaatgagaatgcc
tataaaacgactgtacttagtagtgcagaggtagagtatgacattgaaaacgagatggat
gcagctgatcttcaaggctatatcaaaaaattaatttcagaactgacaccacgacaacaa
gaagtatttcatttaagtcgtgaggaacatctcagttataaagaaatagctattcgatta
tctatcagtgaaaaaacagtagagcgtcatattaatgaagccttaaaatttttacgtaag
aacatctatttattttttatatttctttctctataa

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