Bacteroides fragilis NCTC 9343: BF9343_0935
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Entry
BF9343_0935 CDS
T00239
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF9343_0935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfs03021
]
BF9343_0935
Transcription machinery [BR:
bfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF9343_0935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_30
HTH_Tnp_ISL3
HTH_38
HTH_AsnC-type
GerE
HTH_23
HTH_24
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CAH06716
UniProt:
Q5LGM3
LinkDB
All DBs
Position
complement(1220474..1221049)
Genome browser
AA seq
191 aa
AA seq
DB search
MKPNRTKEDILLLSQLQQGDKKAFNTLFRRYYPILCAYAHRFVDLEDAEEIVQDVMLWLW
ENREILLIESSLSQYLLKMIYHRSLNRIAQKEVKYRADTLFYEKSQAMIYDVDFYQIEEL
TKRIHTAIAELPESYREAFIMHRFRDMSYKEIAQTLNTSTKTVDYRIQQALKLLRKELKE
FLSFALIFLAA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaatcggacaaaagaagacattttactgctttcccaacttcagcaaggagat
aaaaaagccttcaatactttgttcagaaggtattatccgatattatgcgcttatgcccac
cgttttgtagacttggaagatgcggaagaaatagttcaggatgtaatgttgtggttatgg
gagaatcgagaaatcttattgatagaatcatcccttagtcaatacctgttgaaaatgata
tatcaccgttcattaaaccgcatcgcacaaaaggaggtaaagtatcgtgccgatacatta
ttttatgagaaaagccaggcaatgatttatgacgtggatttctatcagattgaggagttg
accaaacggattcacaccgcgatagcggagttaccggaatcttaccgggaagcgtttatc
atgcaccggttcagagatatgagctacaaagaaatcgcacaaactcttaacacctctacc
aaaacagtagattaccgcatacaacaggcactaaaattattacgtaaagaactcaaagag
ttcctgtcgttcgccttgatatttctggcagcgtaa
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