Botrytis cinerea (Gray mold): BCIN_04g03970
Help
Entry
BCIN_04g03970 CDS
T01072
Symbol
Bcret1
Name
(RefSeq) Bcret1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bfu
Botrytis cinerea (Gray mold)
Pathway
bfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCIN_04g03970 (Bcret1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_04g03970 (Bcret1)
Enzymes [BR:
bfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCIN_04g03970 (Bcret1)
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
BCIN_04g03970 (Bcret1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
5438107
NCBI-ProteinID:
XP_024548343
LinkDB
All DBs
Position
4:complement(join(1410507..1413336,1413387..1413782,1413836..1413990,1414040..1414108,1414160..1414285,1414337..1414402))
Genome browser
AA seq
1213 aa
AA seq
DB search
MPPKKKTAGPVEAPAEESSAKKAQESAPEVDGPSVEPENPKRKRATKTRQAPAVVEPAPK
RDDDGFAALLEPFYDGKSLTDPISTAKDKWNLVPAFLKVKGLVKQHIDSFNYFVEHEIKD
IVKANKRVTSEVDPKFWLEYTDIRVGEPERMDYDDRKPQNEITPNECRLRDMTYAAPIRV
DIKYMRGRTIVARKNIAIGRMPIMLKSSKCRLAGKNDRQMAHMNECALDPGGYFVVNGTE
KVILVQEQLSKNRVIIEADPKKGIVSASVTSSTHERKSKSYVMLKKERISLQHNILTEAL
PIVIVLKAMGIQSDHELLLLVAGSDERYQDEFSVNFEEATKLGVHTQHQALEYIGSRVKM
GSRARAPGGGPRSRSYVNDALEALANIIITHVPVVGLDFRPKALYICFMVRRVLMAMVNP
TLVDDRDYVGNKRLELAGQLLSLLFEDLFKKFNTDLKMNIDKVLKKPNRGMEFDAYNHMQ
SHGNYITIGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKV
SGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTYDDEEPVKKLTFVLGAEDIVS
MSGKEIYEKGAYVIFVNGTPLALTRQPKKFLNSFRKFRRMGRISEYISIFINHHSTSVHI
ATDEGRICRPLIIVENQKPKVTKRHLEELRKGTMDFDDFLYKGLLEYVDCNEENDSNIAI
RENYINEATTHLEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFSRI
DTLLYLMVYPQQPMVKTRTIELIKYDKLPAGQNATVAVMSFSGYDIEDALVLNKASCDRG
FGRCQVFRKYSTQLKKYPNRSQDRIADRVIGENGKPIAKHRILGTDGIALVGERINAGEV
YLNKESPSNPNSTGMGNDFNLNDMKPAPMGYKLHDHAYIDKVMLSQTENESGVLKVQTRQ
TRRPELGDKFSSRHGQKGVVGIIVNQEDMPFADSGVTPDIIMNPHGFPSRMTVGKMLELL
SGKAGVINGSLEYGTCFGGSNVDVMGQILIDNGFSYSGKDFVTSGITGESLPAYVFFGPI
YYQKLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLER
LMLSSDAHQVDICETCGLMGYSGWCQTCKSSKGVSTMTMPYAAKLLVQEMLSMNVLVRLK
LEDEFPHSGHVRG
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaagaagaagactgctgggcccgtagaagctccagccgaggaaagctctgcg
aagaaggctcaagaatctgcgccagaagtcgatggaccctcagtagagcccgaaaatccc
aagcgcaagagggcgacgaaaaccagacaagctcctgctgtcgtggagcctgcgcctaag
agagatgacgatggctttgctgctttactcgaaccattctacgatggaaaaagcttgacg
gatccgatcagtactgcaaaggataaatggaatcttgtaccggcctttttaaaggtcaaa
ggtcttgttaagcagcatatcgactccttcaactattttgtcgagcatgaaataaaagac
attgtcaaggcaaacaagagagtcaccagcgaggtcgaccccaaattttggttggaatat
accgatattcgtgttggcgaaccggaacggatggactatgatgatcgcaaaccacaaaat
gaaatcacacctaatgaatgtcgtcttcgtgacatgacatatgctgcgccaattagagtc
gacattaaatatatgcgaggaaggactatagtagctaggaagaatatcgcaattggcaga
atgcctattatgttgaaaagctcaaaatgtcggctggctgggaagaatgatcgccagatg
gctcatatgaacgagtgtgctttggatcctggaggatatttcgttgttaatggtacagag
aaagtcattcttgttcaagaacaactcagcaagaacagagttattatcgaagcagatccc
aagaaaggaatcgtttctgcatctgttactagttctacacatgagcgtaagtcaaaaagt
tatgtgatgcttaagaaggagcgaatctctcttcagcataatatcttgacagaagcttta
ccgattgtgattgtattgaaagccatgggaatccaatcagatcatgaattgttacttcta
gtcgctggatctgatgagagatatcaagacgaattttcagtgaactttgaagaagccact
aaacttggtgttcacactcaacatcaagctcttgaatatatcggatctcgcgtcaaaatg
ggcagccgagcccgagcaccgggaggtggacctcggagtcgcagttatgttaatgatgct
ctcgaagcactcgcaaatattataatcacacatgttccggttgttggtctagacttccgc
ccaaaagcactctatatttgctttatggttcgccgagtcctcatggctatggtaaaccca
acgctcgttgatgaccgagattacgttggtaataagcgtttggaacttgctggacaactt
ctttctttgcttttcgaagatttgttcaagaagttcaacactgatctgaagatgaacatt
gataaagtcctgaagaaacctaacaggggtatggaatttgatgcatacaatcacatgcag
tctcacggcaattacatcaccattggtatgaaccgcgctatttcgacaggaaactggagt
ttgaaacgattcaagatggaacgggctggtgttacgcacgttctcagtagactcagttac
atcagtgctcttggaatgatgacaagaatcagcagtcagtttgagaagactagaaaagtc
agtggacctagagctttacaaccttctcaatttggcatgctttgcacatccgatactcct
gaaggagaagcctgtggactggttaaaaatttggcactcatgactcacatcactacctat
gatgatgaagagcctgtcaaaaaactaactttcgttcttggcgcagaagacatcgtttct
atgagtggtaaagaaatttacgagaagggagcctacgttattttcgttaatggaacgcct
ctcgcactcactcggcaacccaagaaattcctcaactccttcagaaaatttcgacgtatg
ggtcgtatttcggagtacatcagcatttttatcaaccatcacagcacatctgttcatatt
gctacagatgaaggtcgaatttgtagacctctgatcattgtggagaaccaaaagcctaag
gttacgaaacgtcatctcgaagagcttagaaaaggaacgatggatttcgacgatttctta
tacaaaggacttctcgaatatgttgactgtaatgaggagaacgattctaatattgctatc
agagaaaactatatcaacgaagcgactacacatcttgaaattgaacctttcactgtgcta
ggagcggttgcgggacttattccatacccacatcacaaccaatctcccagaaacacatat
caatgtgctatgggtaagcaagctattggtgccattgcatacaaccaattttctcgtatt
gatactttactttatcttatggtctatccacaacaacctatggtcaagactcgtacgata
gagttaatcaaatacgacaaacttcctgctggtcaaaatgccacggtcgctgttatgtcc
ttttcaggttacgatattgaggatgctcttgttcttaataaagcctcttgtgatcgtgga
tttggacgttgtcaagtgttccgtaaatattcaacacaattgaagaagtatcctaatcga
tctcaagatcgtattgctgatagggttattggcgaaaatggcaaacctattgcaaaacac
agaatattgggaactgatggaatcgcgttagtgggtgagagaatcaatgctggcgaagtt
tatctaaacaaggaatccccttcaaatccaaattcaaccgggatgggcaatgattttaac
ctaaatgatatgaaacctgcaccgatgggttacaaactacacgatcatgcttacattgat
aaggtcatgctctcccaaacagagaatgaaagcggagtccttaaagttcaaactcgtcaa
actagacgacctgagttaggagacaaattctcatctcgccatggtcaaaaaggtgttgtt
ggtatcattgtcaatcaagaagatatgccatttgcggattcaggagttactcccgatatt
atcatgaaccctcacggtttcccatctcgtatgacagttggtaaaatgttggaattgctc
tctggaaaagctggtgtcattaatggctctcttgaatatggtacttgttttggaggtagt
aatgttgacgtcatgggacaaattttaatcgacaatggatttagttactcgggtaaagat
ttcgtcacaagtggtattacgggagaatctctaccagcctacgtcttcttcggtccaatc
tactatcaaaaacttaagcacatggttcaagataaaatgcattctcgatctcgcggtcct
cgtgccattctcactcgtcaacctacagaaggtagatcgagagatggaggtcttcgtttg
ggtgagatggaaagagattgtcttattgcttatggtgcaagtcaactgttgcttgagaga
cttatgttgagtagtgatgctcatcaggtggatatttgcgaaacttgtggattgatgggg
tactcgggttggtgtcagacctgtaagagttccaagggagtgagtacgatgacgatgcca
tatgcggcaaagttgttggtgcaggaaatgttgagtatgaatgtcttggtgagattgaag
ctagaggatgaatttcctcattcgggccatgtgagaggatga
DBGET
integrated database retrieval system
