Botrytis cinerea (Gray mold): BCIN_13g02370
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Entry
BCIN_13g02370 CDS
T01072
Symbol
Bcsmx3
Name
(RefSeq) Bcsmx3
KO
K11098
small nuclear ribonucleoprotein F
Organism
bfu
Botrytis cinerea (Gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_13g02370 (Bcsmx3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_13g02370 (Bcsmx3)
03041 Spliceosome [BR:
bfu03041
]
BCIN_13g02370 (Bcsmx3)
03032 DNA replication proteins [BR:
bfu03032
]
BCIN_13g02370 (Bcsmx3)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
BCIN_13g02370 (Bcsmx3)
Spliceosome [BR:
bfu03041
]
Complex A
U1 snRNP components
Sm proteins
BCIN_13g02370 (Bcsmx3)
U2 snRNP components
BCIN_13g02370 (Bcsmx3)
Complex B
U1 snRNP components
BCIN_13g02370 (Bcsmx3)
U4/U6.U5 tri-snRNP components
BCIN_13g02370 (Bcsmx3)
Complex C
U2 snRNP components
BCIN_13g02370 (Bcsmx3)
DNA replication proteins [BR:
bfu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
BCIN_13g02370 (Bcsmx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
5435823
NCBI-ProteinID:
XP_001555293
UniProt:
A0A384K0T3
LinkDB
All DBs
Position
13:complement(join(826932..827004,827165..827323,827428..827465,827517..827522))
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AA seq
91 aa
AA seq
DB search
MSFVPINPRPFLQNLVNEEVIIRLKWGGQTEYKGKLVSIDSYMNIQLSGAEEWIDSEMTS
TLGQVLIRCNNVLYISAAQIKKEEDDTKMEG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtaccaattaacccccgtccgttccttcaaaacctcgtcaacgaagaagta
atcatccgtctaaaatggggcggtcaaaccgaatataaaggaaagcttgtcagtatcgac
agttacatgaatatccaattatccggcgccgaggaatggattgattcggaaatgacgagt
actttgggtcaagtcttgattagatgcaataacgtgctttacatatcagccgcacaaatc
aagaaggaagaggatgatacgaagatggagggatga
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