Borrelia garinii subsp. bavariensis: BG0458
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Entry
BG0458 CDS
T00194
Symbol
ntrA
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bga
Borrelia garinii subsp. bavariensis
Pathway
bga02020
Two-component system
bga02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BG0458 (ntrA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BG0458 (ntrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bga03021
]
BG0458 (ntrA)
Transcription machinery [BR:
bga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BG0458 (ntrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
MarR
HTH_36
HTH_11
TT_ORF1
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AAU07301
UniProt:
A0A7I6GWC0
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All DBs
Position
complement(472236..473393)
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AA seq
385 aa
AA seq
DB search
MEESENNECLEIDSNKIFFETLKTYRFKKVFYKEDNMIKNQHDIALEKTQTNTSLKEHLL
LQLRIQRINEDELKIGEILINNLNNKGFHIINPYDLFKKEEKEKVKKIIELIQKFDPIGI
CVPNIIESLILQAKHHKLETNIIKILEKAELLEKTQEKLKEELKIRSKEFNKALEIIRQK
LNPNPTLEFKDPEDTNFYVDPDILIINHNNKFEIKIKEVNIFKKELKKTAINPQKQKKAK
WLIESLRYRDEILAKIGIAIYTLQKEFLRRGFKSLRPMNLSILSEKISVSKSTISRAIKN
KYLKCEWGTILIKELFSSVGGAKTNEFSKLSIKITVKKLLEVNKKMSDKAISAILKSKGI
SISRRTVNKYRNELKSEKGKIYYGT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaaagtgaaaataacgaatgcctagaaatagactcaaacaaaatattttttgaa
acattaaaaacatataggtttaaaaaagttttttataaagaagataatatgataaaaaat
caacacgacatagctcttgaaaaaacacaaacaaatacttctttaaaagaacacctttta
ctacaactaagaattcagagaataaatgaagatgaacttaaaataggtgaaatattaata
aacaatctaaacaacaaagggtttcatataataaacccttacgacctttttaaaaaggaa
gaaaaagaaaaagtaaaaaaaataattgaacttattcaaaaatttgatccaattggaatt
tgcgttcccaatataatagaatcgttaattttacaagcaaagcatcataaattagaaacc
aatattattaaaattcttgaaaaggcagaacttcttgaaaaaactcaagaaaagttaaaa
gaagaacttaaaataagaagtaaagaatttaacaaagctttagaaattataagacaaaaa
ctcaatcccaacccaacactcgaatttaaagacccagaagatactaatttctatgttgat
ccagatatattaataataaaccacaataacaaatttgaaattaaaatcaaagaagttaac
atctttaaaaaagaacttaaaaagacagctataaatcctcaaaaacaaaaaaaagcaaaa
tggttaatagaatcattaagatatagagacgaaatacttgcaaaaataggaatagctata
tatacattgcaaaaagaatttctaagaagaggttttaaaagcttaagaccaatgaacttg
agcattttgtcagaaaaaataagtgtatcaaaatcaacaatatcaagagcaataaaaaat
aaatatttaaaatgtgaatggggtactatattaatcaaagagctctttagctctgttggt
ggagcaaaaacaaatgaattttcaaaattaagcattaaaataacagtaaaaaagttacta
gaagtaaataaaaagatgtcagataaagcgatttctgctatactgaaatccaaagggatc
tctatttctagaagaacagtaaacaagtatagaaatgaattgaaatctgagaaaggaaaa
atatattatggaacctaa
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