Paraburkholderia atlantica CCGE1002: BC1002_1417
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Entry
BC1002_1417 CDS
T01217
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bge03009
]
BC1002_1417
Enzymes [BR:
bge01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BC1002_1417
Ribosome biogenesis [BR:
bge03009
]
Prokaryotic type
ribosomal protein modification factors
BC1002_1417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ADG15493
UniProt:
D5W7U8
LinkDB
All DBs
Position
1:1576338..1577780
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AA seq
480 aa
AA seq
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MANRYNSRFNVFKRFPMSSTPSNAPAAPGATPKVGFVSLGCPKALVDSEQIITQLRAEGY
EISGTYNGADLVVVNTCGFIDEAVQESLDAIGEALNENGKVIVTGCLGAKKSASGSGLIE
EVHPKVLAVTGPHAVGEVMQAVHSHLPKPHDPFVDLVPAAGVKLTPRHYAYLKISEGCNH
RCTFCIIPSMRGDLVSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNG
KPIKTRMTDLVAALGELAAQYGAWVRLHYVYPYPSVDEVIPMMAAGPYKGHVLPYLDVPF
QHAHPEVLKRMKRPANAEKVMERVKAWREICPDLTIRSTFIAGFPGETEEQFETLLDFIR
EAELDRVGCFAYSPVEGASANELDGALPDEVRGERRARFMEVAEQVSAKRIAKKVGKTLK
VLVDEINADGGIGRTAADAPEIDGVVYIAPSTKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaccgctacaattcacggtttaacgtcttcaagcggttccccatgtcttccacc
ccctcgaacgctccggccgcgccgggcgccacgccgaaagtcggcttcgtttccctcggc
tgccccaaggccctcgtcgattccgagcagatcatcacgcagctgcgcgccgaaggctac
gaaatctccggcacctataacggcgcggacctcgtggtcgtcaacacgtgtggcttcatc
gacgaagccgtgcaggaaagcctcgacgcgatcggcgaagcgctcaacgaaaacggcaag
gtgatcgtcaccggttgcctcggcgcgaagaagagcgcgagcgggtcggggctgatcgag
gaagtgcatccgaaggtgctcgcggtgaccggcccgcacgcggtcggcgaggtgatgcag
gcggtgcacagccatctgccgaagccgcacgacccgttcgtcgatctggtgcccgccgcg
ggcgtcaagctcacgccgcgccactacgcgtacctgaagatttccgaaggctgcaatcat
cgctgcacgttctgcattatcccgtcgatgcgcggcgatctggtgtcgcgcccggtcgca
gaagtgatgctcgaagcggagaacctgttcaagtccggcgtgaaagaactgctcgtcatt
tcgcaggacacgagcgcatacggcgtcgacgtcaaataccgcaccggtttctggaacggc
aagccgatcaagacgcgcatgacggatctggtcgccgcgctcggcgaactcgccgcgcaa
tacggcgcgtgggtgcgtctgcattacgtgtatccgtatccgagcgtcgacgaagtgatt
ccgatgatggccgcgggtccgtacaagggccacgtgctgccgtatctcgacgtgccgttc
cagcacgcgcatccggaagtgctcaagcgcatgaagcgaccggccaacgccgagaaggtg
atggagcgcgtgaaggcatggcgcgagatctgcccggatctgacgatccgcagcacgttc
atcgccggcttcccgggcgagaccgaagagcagttcgagacgctgctcgacttcattcgc
gaggcggagctcgatcgcgtgggctgcttcgcgtactcgccggtcgaaggcgcgagcgcg
aacgagctcgacggcgcgttgcccgacgaagtgcgtggggaacgtcgcgcgcgcttcatg
gaagtggccgagcaggtgtcggcgaagcgtatcgcgaagaaggtcggcaagacgctgaag
gtgctggtcgacgagatcaacgcggacggcggcatcggtcgcaccgcggcggatgcgccg
gagatcgacggcgtcgtctatatcgcgccgtccaccaaagcgtcgaagcgctacaaggtc
ggcgatttcgtgtcggtgaagatcaccggcgcggacggtcacgatttgtggggcgaggtc
taa
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