KEGG   Paraburkholderia atlantica CCGE1002: BC1002_2198
Entry
BC1002_2198       CDS       T01217                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bge  Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:bge00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bge03019]
    BC1002_2198
   03009 Ribosome biogenesis [BR:bge03009]
    BC1002_2198
Messenger RNA biogenesis [BR:bge03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BC1002_2198
Ribosome biogenesis [BR:bge03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    BC1002_2198
SSDB
Motif
Pfam: RNase_T Rv2179c-like CTD1
Other DBs
NCBI-ProteinID: ADG16257
UniProt: D5WAV2
LinkDB
Position
1:complement(2460599..2461210)
AA seq 203 aa
MTDILASTEQPPLVRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRMVEGPVLAI
HQSDETLAKMDEWNQNTHGRSGLIDRVKVSTVSEADATAQIREFLGQYVPPGKSPMCGNS
ICQDRRFMARWMPDLESFFHYRNLDVSTLKELCRRWQPVIYKGFQKRAMHTALADIHESI
DELKYYREHFLVPSAPDAAASAK
NT seq 612 nt   +upstreamnt  +downstreamnt
atgactgacatcctcgcatccaccgaacagccgccgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgagcccgacaccgatcgcatcatcgagatc
gcggtggtggtgacgaattcgacgctcgacaggatggtcgaaggtccggtgctcgcgatt
catcagagcgatgagacgctcgcgaagatggacgagtggaaccagaacacacatggccgc
tccgggctgatcgatcgcgtgaaggtgtcgacggtcagcgaggcggacgcgaccgcgcag
attcgcgagtttctcggccagtacgtgccgccgggcaagtcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgccagatctggagagcttcttccac
taccgcaacctcgacgtgagcacgctgaaggagctgtgccggcgctggcagccggtgatt
tacaagggctttcagaagcgcgcgatgcacaccgcgctggccgatattcacgagtcgatc
gacgaactgaagtactaccgcgagcatttcctcgtgccatcggcgcccgacgccgccgcg
agcgctaaataa

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