Paraburkholderia atlantica CCGE1002: BC1002_2198
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Entry
BC1002_2198 CDS
T01217
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bge03019
]
BC1002_2198
03009 Ribosome biogenesis [BR:
bge03009
]
BC1002_2198
Messenger RNA biogenesis [BR:
bge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BC1002_2198
Ribosome biogenesis [BR:
bge03009
]
Eukaryotic type
Pre-60S particles
RNases
BC1002_2198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CTD1
Motif
Other DBs
NCBI-ProteinID:
ADG16257
UniProt:
D5WAV2
LinkDB
All DBs
Position
1:complement(2460599..2461210)
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AA seq
203 aa
AA seq
DB search
MTDILASTEQPPLVRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRMVEGPVLAI
HQSDETLAKMDEWNQNTHGRSGLIDRVKVSTVSEADATAQIREFLGQYVPPGKSPMCGNS
ICQDRRFMARWMPDLESFFHYRNLDVSTLKELCRRWQPVIYKGFQKRAMHTALADIHESI
DELKYYREHFLVPSAPDAAASAK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcctcgcatccaccgaacagccgccgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgagcccgacaccgatcgcatcatcgagatc
gcggtggtggtgacgaattcgacgctcgacaggatggtcgaaggtccggtgctcgcgatt
catcagagcgatgagacgctcgcgaagatggacgagtggaaccagaacacacatggccgc
tccgggctgatcgatcgcgtgaaggtgtcgacggtcagcgaggcggacgcgaccgcgcag
attcgcgagtttctcggccagtacgtgccgccgggcaagtcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgccagatctggagagcttcttccac
taccgcaacctcgacgtgagcacgctgaaggagctgtgccggcgctggcagccggtgatt
tacaagggctttcagaagcgcgcgatgcacaccgcgctggccgatattcacgagtcgatc
gacgaactgaagtactaccgcgagcatttcctcgtgccatcggcgcccgacgccgccgcg
agcgctaaataa
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