Paraburkholderia atlantica CCGE1002: BC1002_2288
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Entry
BC1002_2288 CDS
T01217
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03030
DNA replication
bge03430
Mismatch repair
bge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BC1002_2288
03430 Mismatch repair
BC1002_2288
03440 Homologous recombination
BC1002_2288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bge03032
]
BC1002_2288
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_2288
Enzymes [BR:
bge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BC1002_2288
DNA replication proteins [BR:
bge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BC1002_2288
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BC1002_2288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADG16347
UniProt:
D5WB42
LinkDB
All DBs
Position
1:complement(2561798..2562946)
Genome browser
AA seq
382 aa
AA seq
DB search
MSELLSPEPALDAPIVFVDLETTGGSTSEHRITEVGVVEVGPAGVSRWSSLVDPQQPIPS
FIQQLTGITNDMVRGAPTFESIAPALFERLNGKLFVAHNASFDRGFLRSEFRRAGIAFDP
DVLCTVRLSRALFPGEKRHGLDALVERHALVPSDRHRALADADLIWQFWQRLPTLVPLDA
LRAQIERTTRRYRLAGDITEDLLDTAPAGCGVYAFYGEGDAPLYVGRSVRVRQRLRSHLT
GERRSSKDMRLAQLVRRVEWRATGGELGAMLAEAQWIATLRPGHNRLPRVTKSDPANAPW
PFEGPIVFEEREDAQRIFHVVDRWRYLGHAPSLVQAAQLHGSALAGAFELSTYRILQSHL
ARGLRVMPLSASRDAPESSIVV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgctttcgccggaaccggcactcgatgcacccatcgttttcgtagacctc
gaaacgaccggcggctcgacgagcgagcaccgcattactgaggttggcgttgtcgaagtc
ggaccggccggcgtatcgcgctggagcagcctggtcgacccgcagcagcccattccgtcg
ttcatccagcaactgaccggcattacgaacgatatggtgcgcggcgcaccgacgttcgaa
tcgatcgcgcccgcgttgttcgagcgcctgaacggcaagttgttcgtcgcgcacaacgcg
agtttcgatcgcggatttttacgcagcgaatttcgtcgcgcgggaattgcgttcgacccg
gacgtgctttgcacggtgcgactgtcgcgtgcgctgtttcccggcgaaaagcgtcatggt
ctcgatgcactcgtcgaacgtcatgcgctggtgccgtccgaccgtcaccgcgcgctcgcc
gacgctgatctgatctggcagttctggcagcgtctgccgacgctcgtgccgctcgacgcg
ctgcgcgcgcagatcgagcgcacgacgcggcgctaccgtctcgccggcgacatcacggaa
gatctgctcgacaccgcgccggcaggctgtggcgtgtatgcgttctatggcgaaggcgat
gcgccgctgtatgtcggccgcagcgtgcgcgtgcgtcagcggctgcgctcgcacctgacc
ggcgagcggcgttcgtcgaaggatatgcgccttgcgcagctggtgcggcgcgtcgaatgg
cgcgcgacgggcggcgagctcggcgcgatgctagcggaggcgcagtggatcgcaacactg
cggccgggccataaccgcttgccgcgtgtgacgaagagcgatcccgcgaacgcgccgtgg
ccgttcgaggggcccatcgtgttcgaggagcgtgaggacgcgcagcgcatcttccacgtg
gtcgatcgctggcggtacctcgggcacgcgccgtcgctcgtgcaggcggcgcagctgcat
gggtctgcgctggcgggtgcgttcgaactctcgacgtaccgtatcctgcaaagccatctg
gcgcgtggtctacgcgtgatgccgttgagcgcgtcgcgtgatgcgccggagtcgagcatc
gtcgtgtga
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