Burkholderia sp. CCGE1003: BC1003_5208
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Entry
BC1003_5208 CDS
T01314
Name
(GenBank) outer membrane porin
Organism
bgf
Burkholderia sp. CCGE1003
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
ADN61128
UniProt:
E1TDK2
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Position
2:complement(1931668..1933254)
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AA seq
528 aa
AA seq
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MKNNSTKFRSKIRSKQSRVTAAIYCAFTLPALAAAANAYADDALTQPAADAGNAAPAAQT
LSSPQAAQPQVTQAPPANKRRAEKGAQIRNDQPDTTNAIVNAEASQVVTPPTPPSSQAAS
KGFIADSHLNLQFRNYADYFQAPNTIYRHAWVQGAQVNYESGFTQGLVGFGVDASLFAAL
KLDGGNGAGNMVHVGKSGGGSQQLAWAYPGMYDIKGRISETVVKYGLQDVTNPFLEPHDN
RALPPTFLGVSLVSNDLAHTTLEAGSFTKVDARGHTNLSNLTTSYGGTRIDRLTYLGGTW
HYAKNGEMSLYVDQADDVWRQYYGSVSQSFGDPTTIKWSGLANIYSTHDTGASRQGHINS
NAYSVSVSAQHGPHGLLLGYQQVLGDQFFDYVNETNGIYLTNSMDVDYNAPHEQSLQLRY
TFDGKYAGVPGLKAMLWGAYGWGADASAAAAENAAPGAALHDLYWKNGQPVHGHHHEFGF
IPSYTLQSGRFKDTKITFIAMWHNGSAYYSDGNNMEYRLVVNVPVKVF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataactcaacaaaattccgctcaaaaatccggtcaaagcagtccagagtcact
gccgcgatttattgcgccttcaccctccccgcactggccgccgccgcaaatgcctatgcc
gacgacgcgctcacgcagcccgcagccgacgccggcaacgccgcgcccgccgcgcaaacg
ttgtcgtccccgcaagcagcgcagccgcaggtgacgcaggcgccgcccgcgaacaagcgc
cgtgcggagaagggcgcccagatccgtaacgatcagccggataccacgaatgccatcgtc
aacgccgaggcatcgcaagtcgtcacgccgcccacgccgccgtcgagccaggcagcgagc
aagggcttcatcgccgatagtcatctgaatctgcaatttcgcaactacgcggactacttt
caggcgccgaacaccatctatcgccatgcgtgggtgcaaggcgcgcaggtcaactacgaa
tccggtttcacgcaagggctggtcggattcggcgtggacgcgtcgctattcgctgcgctc
aagctcgacggcggcaatggcgcgggcaacatggtgcacgtgggcaaaagcggcgggggc
tcgcagcaactcgcatgggcgtaccccggcatgtacgacatcaagggacgcatatcggag
acggtcgtcaaatacggcttgcaggacgtgacgaatccttttctcgaaccgcacgacaac
cgcgcgctgccgcccacctttctcggcgtctcgctcgtcagcaacgatctggctcacacc
acgctcgaggccggcagcttcaccaaggtcgacgcacgcggccacaccaatctgagcaac
ctgaccacctcgtacggcggcacgcgcatcgaccggctgacctatctgggcggcacctgg
cactatgcgaagaacggcgaaatgtcgctctatgtcgaccaggccgacgacgtctggcgt
cagtactacggttcggtttcgcagtcgttcggcgatccgaccaccatcaagtggagcggc
cttgccaacatctactcgacgcacgacaccggcgcatcgcgacaggggcatatcaacagc
aatgcatacagcgtgtcggtgtccgcgcaacacgggccgcatgggttgctgctcggctat
cagcaggtgctcggcgaccagttcttcgactatgtgaacgagaccaacggcatctatctg
accaactcgatggacgtcgactataacgcgccgcatgagcaatcactgcaattgcgctat
acgttcgacggaaaatacgcgggcgtgccgggactcaaggcaatgctgtggggcgcgtat
ggctggggtgccgatgcctcggcggcagcggcggaaaatgccgcgccgggtgcagcgctg
catgatctgtactggaagaacggtcagccggtgcacggccatcatcacgagttcggcttc
attccgagctatacgctgcaaagcggccgcttcaaggacacgaaaatcacattcatcgcg
atgtggcacaacggcagcgcttactattcggacggcaacaacatggagtaccgtctggtc
gtgaatgtgccggtgaaggtgttctaa
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