Brachybacterium ginsengisoli: CFK41_05980
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Entry
CFK41_05980 CDS
T05099
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bgg
Brachybacterium ginsengisoli
Pathway
bgg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFK41_05980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_05980
Enzymes [BR:
bgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CFK41_05980
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CFK41_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ATG54368
UniProt:
A0A291GW12
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All DBs
Position
1352972..1353793
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AA seq
273 aa
AA seq
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MTLTLATVNVNGLRAAARKGMPDWLATTSADVITLQEVRAPDELLAGLVGEGWSIVGEAS
QLKGRAGVAVAVRTSREDVDLETARRGLPGLEGDAHTGRWMEVDLEDPFGDGRTLTVISC
YMHSGNTEKPQTMTDKYAFLDVAMARLEELRAAGGHVVLTGDINIAHAEWDIKNWKGNLK
SAGFLPEERAYLDRLTSEGGYTDVHRRLHGDGPGPYTWWSQRGKAFDNDSGWRIDYQLAT
EDLASRAATAQVDRAPSYDTRWSDHAPLVISYS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaccctcgccaccgtcaacgtcaacggcctgcgcgccgccgctcggaagggg
atgcccgactggctcgccaccacctcggcggacgtcatcaccctgcaggaggtgcgcgcc
cccgatgagctgctcgccggtctggtcggcgagggctggagcatcgtcggagaggcctcg
cagctcaagggccgcgccggcgtcgcggtcgccgtgcgcacctcccgagaggacgtcgat
ctcgagacggcgcggcgcggcctgcccgggctcgagggcgatgcgcacaccggtcgctgg
atggaggtcgatctcgaggaccccttcggcgacggccgcaccctcaccgtgatctcctgc
tacatgcactcggggaacaccgagaagccgcagacgatgaccgacaagtacgccttcctc
gacgtggccatggcccgtctcgaggagctgcgtgccgccggcggccacgtggtgctcacc
ggcgacatcaacatcgcccatgccgagtgggacatcaagaactggaagggcaacctgaag
tccgccggcttcctgcccgaggagcgcgcctacctcgaccggctgacctccgagggcggg
tacacggatgtgcaccgccgcctccacggcgacggccccggcccgtacacctggtggtcg
cagcgcggcaaggcgttcgacaacgactcgggctggaggatcgactaccagctggccacc
gaggatctcgcctcccgcgcggccaccgcccaggtggaccgtgcgccgagctacgacacc
cgatggtccgaccacgcaccgctggtgatcagctactcctga
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