Blastomyces gilchristii: BDBG_01279
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Entry
BDBG_01279 CDS
T06540
Name
(RefSeq) tRNA-intron endonuclease, archaea type
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
bgh
Blastomyces gilchristii
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgh03016
]
BDBG_01279
Enzymes [BR:
bgh01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
BDBG_01279
Transfer RNA biogenesis [BR:
bgh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
BDBG_01279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
8510577
NCBI-ProteinID:
XP_002628371
UniProt:
A0A179UE35
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MASSTTSAVSTVSNGRLNSSNNSNLDPQKDAAKYPPARPRRPNYKHIHRFPLPLHVYPLP
PLIPHNPLSLISIALSYLTYLISPPHQHIYTAYFDPSTSSIHVTDARAIRTLWEMGFFGK
GSLSRSEPSWLDREKNRRGLTGDATSEEVTGKRRLERRERKLERARKEKEAIAEQLKAEA
QLRDARGDFQSSELDKTFTALESPVHDAAVAQLDDKPRDTHGQESTVTANNSSISKQDMT
NGHVGSVRSNGGKTVRFSPVVEQKCYDAQATIPWLPEPSIPSTDKNEHTVVLKNEEHLQL
SNEEALFLVYGLGVLQVYNSDRTSILSASSLLTVFRQHSYFPPRESSAPAQPDDPFMLSY
VVYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWTATEERRQKT
AKKEGRTWWWLHCVNRVQAQVKKSLVLCYVEVPPPHTQPPPTDATGEGGELDIGTLLRTY
KVREMTIKRWVPNRSRD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtctaccacttcggccgtttcgactgtttcaaatggccgtctaaactctagt
aataatagcaacttggatccccaaaaagatgcagctaaatacccccctgctcggccacgg
cggcccaattataaacatatccatcgtttccctcttcctctccatgtctacccgttacca
cctttaatcccccacaatcccctctctctaattagcatagctctatcgtatctcacatac
ttgatctctcctcctcaccagcacatctacaccgcgtactttgatccatcaacgtcttca
atccatgtcactgacgcgagagcgatacgtacgctgtgggagatgggattcttcgggaaa
ggtagcctgagtaggagtgagccaagttggttagaccgagagaaaaatagaagaggattg
accggcgatgctacaagtgaggaggttacagggaagagaagattagaacgccgggaacgc
aaacttgagcgagccaggaaggaaaaagaggctattgcggaacagctgaaagcggaagca
caattgcgggatgctcgtggtgactttcaatctagtgaacttgataaaacgtttactgcc
ctagaaagccccgttcatgacgcagctgttgctcaactggacgacaagccccgagacact
cacggccaagagtccacagttacagcaaataattcctccatctccaagcaagatatgacc
aatgggcatgttggaagtgtacgttcgaatggcggtaagactgtacgcttctcaccggtg
gtcgaacaaaagtgctatgatgctcaagctactataccatggttacctgaaccttcaatc
ccgtctacagacaaaaatgagcacacagtagtactcaaaaatgaagaacatctgcaatta
tcgaacgaagaagctctctttctcgtctatggtctaggtgttctacaagtgtataacagt
gaccgcacatcgatcctctctgcatcttcccttctaactgtcttccgccaacattcctac
ttcccgccacgagagtcatctgctcctgcccaaccagatgatccatttatgttatcttat
gtcgtataccatcatttccgctcccttggctgggttatccgctccggtgtaaaattcggt
gtcgattacctcctctacaaccgcgggccggtattctcccatgccgagttcgcagtttgt
ttgctccccgcctactccgatccttactggacagcgactgaagaaagacgacaaaagact
gcgaagaaagagggccgaacttggtggtggctgcactgtgtgaacagagtccaagcccag
gtcaagaagagtttggtcctatgttatgtagaagtgccacctcctcacacccagcctcca
cctaccgatgccactggggagggtggtgaattggatattggtacgctgctgagaacgtac
aaggtccgtgaaatgaccattaaacgatgggtgccaaatcgaagtcgcgattga
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