Alkalicoccobacillus gibsonii: BGM20_10660
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Entry
BGM20_10660 CDS
T04820
Name
(GenBank) DNA-binding response regulator
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BGM20_10660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
bgi02022
]
BGM20_10660
Two-component system [BR:
bgi02022
]
NarL family
LiaS-LiaR (cell wall stress response)
BGM20_10660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_24
HTH_23
HTH_40
DUF6200
Motif
Other DBs
NCBI-ProteinID:
AOL31053
LinkDB
All DBs
Position
complement(2051540..2052175)
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AA seq
211 aa
AA seq
DB search
MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM
DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK
GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT
VKTHITNILSKLDVSDRTQAAVYAHRNHLVN
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgagtattattgattgatgatcatgaaatggtcagaatggggctcgcggctttt
ttggaggcgcagcccgatattgaagtcatcggcgaagcatcggacggcagcgaaggtgtt
cggcttgctgtggaactgtcgcctgatgtcattttaatggaccttgtcatggagggcatg
gatggcattgaagctacaaagcaaatttgccgggagctttccgacccgaaaattattgtg
ctcactagcttcattgatgatgacaaagtgtacccggttattgaagctggcgcgctcagc
tatctgttgaaaacctcaaaagcggcagaaatcgccgatgccatccgcgccgcaagcaag
ggagagccgaagctggagtcaaaagtggcgggaaaagtattatccaggctgcgccactca
ggtgaaaacgcgctcccgcatgaatcgcttacaaaacgggagctcgaaatactctgcctg
atcgcagaaggaaagacaaacaaagaaataggcgaggaactgtttattacgattaaaaca
gtcaaaacacatattacgaatattttatcaaagctggatgtcagtgaccggacgcaggcg
gcggtgtacgcacaccgaaatcatctcgtgaattag
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