KEGG   Burkholderia glumae BGR1: bglu_2g07300Help
Entry
bglu_2g07300      CDS       T00905                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bgl  Burkholderia glumae BGR1
Pathway
bgl03030  DNA replication
bgl03410  Base excision repair
bgl03420  Nucleotide excision repair
bgl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bgl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    bglu_2g07300
   03410 Base excision repair
    bglu_2g07300
   03420 Nucleotide excision repair
    bglu_2g07300
   03430 Mismatch repair
    bglu_2g07300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bgl03032]
    bglu_2g07300
   03400 DNA repair and recombination proteins [BR:bgl03400]
    bglu_2g07300
Enzymes [BR:bgl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     bglu_2g07300
    6.5.1.6  DNA ligase (ATP or NAD+)
     bglu_2g07300
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     bglu_2g07300
DNA replication proteins [BR:bgl03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    bglu_2g07300
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     bglu_2g07300
DNA repair and recombination proteins [BR:bgl03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     bglu_2g07300
   NER (nucleotide excision repair)
    Other NER factors
     bglu_2g07300
   MMR (mismatch exicision repair)
    Other MMR factors
     bglu_2g07300
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: ACR31149
UniProt: C5AMU8
LinkDB All DBs
Position
2:867436..869103
Genome map
AA seq 555 aa AA seqDB search
MKRFATLYAALDATTSTNVKLEALIAYFASAAPEDAAWASYFLAGGKPRQTVPTRVLAEA
ARERAGLPAWLFEESYQAVGDLAETIAHVLPPPARESALGLAQWIEQRVLGLRGLDAAAL
RERLAGYWDELDWSERFLLTKLIGGGFRVGVSRQLVVRALAQVAGVDHKRIAQRMVGWTD
SRQTPSAARYLRLIAPAGDGDDPARPHESDLGLPYPFFLAHPLQADPATLGPVEDWIVEW
KWDGIRAQLVKRAGRVWLWSRGEDLVTERFPELAALGEALPDGTVIDGEILAWEPGAAAP
LPFARLQPRITRKSLTRKVLADSPAALLAYDLLEAEGRDLRAVPLATRRTRLEALAAALS
RTLAVDLLRVSPRVTADGWPALAARRAESRARGVEGLMLKAAASEYGVGRTKASGVWWKW
KIEPYAIDAVLLYAQRGHGRRASLYTDFTFAVWDEAGGVRTLVPFAKAYSGLTDEEMRQV
DAVVRKTTIEKFGPVRSVTPTLVFEIGFEGIQASPRHKSGIAVRFPRMLRWRTDKSIDEA
DTLEMLKGFLNGAPA
NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt
atgaagcgcttcgcgacgctctacgccgcgctcgacgcgaccacctccaccaacgtcaag
ctcgaggcgctgatcgcctatttcgcgagcgccgcgcccgaggatgcggcctgggcctcg
tatttcctcgcgggcggcaagccgcgccagaccgtgcccacgcgcgtgctggccgaggcc
gcgcgcgagcgcgccggcctgccggcctggttgttcgaggagtcgtaccaggcggtgggc
gacctggccgagacgatcgcccacgtgctgccgccgcccgcgcgcgaatcggcgctgggg
ctcgcgcagtggatcgagcagcgcgtgctgggcctgcgcggcctcgatgccgcggcgctg
cgcgagcgcctggccggctactgggacgaactcgactggagcgagcgcttcctgctcacc
aagctgatcggcggcggcttccgggtgggcgtgtcgcgccagctggtggtgcgcgcgctc
gcgcaggtggcgggcgtcgatcacaagcgcatcgcgcagcgcatggtcggctggaccgat
tcgcgccagacgccgagcgccgcgcgttatctgcggctgatcgcgccggccggcgacggc
gacgatccggcgaggccgcacgaaagcgacctcggcctgccgtatccgttcttcctcgcc
cacccgctgcaggccgatccggccacgctcgggccggtcgaggactggatcgtcgaatgg
aagtgggacggcattcgcgcccagctcgtcaagcgcgcgggccgcgtctggctctggtcg
cgcggcgaggacctcgtgaccgagcgttttccggagctggccgcgctcggcgaggcactg
cccgacggcaccgtgatcgacggcgagattctcgcctgggagccgggcgccgctgcgccg
ctgccgttcgcgcgcctgcagccgcgcatcacgcgcaagtccctgaccaggaaggtgctg
gccgattccccggcggcgctgctcgcctacgacctgctcgaagccgagggccgcgacctg
cgcgccgtgccgctcgcgacgcggcgcacgcggctcgaggcgctggccgcggcgctctcg
cgcacgctcgccgtcgatctgctgcgggtctcgccgcgcgtgacggcggacggctggccg
gcgctcgccgcgcggcgcgccgagagccgcgcgcgcggcgtggaagggctgatgctgaag
gcggcggcgtcggagtacggcgtcggccgcaccaaggcctccggggtctggtggaagtgg
aagatcgagccgtatgcgatcgacgcggtgctgctctacgcgcagcgcggccacggccgg
cgcgcgagcctctataccgacttcacgttcgcggtgtgggacgaggccggcggcgtgcgt
accctcgtgccgttcgccaaggcctattccgggctgaccgacgaggagatgcgccaggtg
gacgcggtggtgcgcaagaccaccatcgagaagttcggcccggtgcgcagcgtcacgccc
acgctggtgttcgagatcggcttcgaaggcatccaggcgagcccgcgccacaagtcgggc
atcgccgtgcggttcccgcgcatgctgcgctggcgcaccgacaagtcgatcgacgaggcg
gacacgctggagatgctcaagggctttctgaacggagcgccggcatga

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