Bordetella genomosp. 13: CAL15_23450
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Entry
CAL15_23450 CDS
T05441
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAL15_23450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgm03021
]
CAL15_23450
03400 DNA repair and recombination proteins [BR:
bgm03400
]
CAL15_23450
Enzymes [BR:
bgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAL15_23450
Transcription machinery [BR:
bgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAL15_23450
DNA repair and recombination proteins [BR:
bgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAL15_23450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ARP97067
UniProt:
A0A1W6ZIH6
LinkDB
All DBs
Position
complement(5206988..5207974)
Genome browser
AA seq
328 aa
AA seq
DB search
MSTQGFLKPRSIEVEPVGTHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMT
GVVHEYSTIPGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKNGAGTVLASDIELPHDVE
IINPDHAICNLTEAGKLEMQIKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRV
SYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEV
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcaaggttttctgaagccgcgctccatcgaagtcgaaccggtcggcacgcat
catgccaagatcgtgatggagcccttcgagcgcggctacggccacacgctgggcaacgcc
ctgcgccgcatcctgctgtcgtcgatgaccggctatgcccccaccgaagtgcagatgacg
ggcgtggtgcacgagtattcgaccatcccgggcgtgcgcgaagacgtcgtcgacatcctg
ctgaacctgaagggcgtggtgttcaagctgcacaaccgcgacgaagtcacgctggtgctg
cgcaagaacggcgccggcacggtgctggccagcgacatcgaactgccgcacgacgtcgag
atcatcaatcccgatcacgccatctgcaacctgaccgaagccggcaagctggagatgcag
atcaaggtcgagaagggccgcggctacgtgccgggcaacgtgcgcgcgctgtccgaagac
cgcacccacaccatcggccgcatcgtgctggacgcctcgttcagcccggttcgccgcgtc
agctacgcggtggaaagcgcccgtgtggaacagcgtaccgacctggacaagctggtgctc
gacatcgaaaccaacggcgtgatctcgcccgaggaagcggtgcgccagtcggcccgcatc
ctgatggaccagatctcggtgttcgccgccctggaaggcgccggcgattcgtacgaagtc
ccggtccgcggcacgccgcagatcgacccggtgctgctgcgcccggtcgacgacctggaa
ctgacggtgcgttcggccaactgcctgaaggccgagaacatctactacatcggcgacctg
atccagcgtaccgagaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaac
gagatcaaggaagtgctggccgcacgcggcctgacgctgggcatgaagctggagaactgg
cccccgctgggtctcgagcgcccgtaa
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