Burkholderia gladioli ATCC 10248: BM43_103
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Entry
BM43_103 CDS
T03826
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BM43_103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgo03400
]
BM43_103
Enzymes [BR:
bgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BM43_103
DNA repair and recombination proteins [BR:
bgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BM43_103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJX01071
LinkDB
All DBs
Position
1:complement(123163..124071)
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AA seq
302 aa
AA seq
DB search
MATGRKVPAKGAVRAATRSPATGRAPAGKVAAKRATDPRAGAVNGVAHSPAARGAAKPAR
AESAERELAAELVDGAARKARANEAALPESSAEAEEVVRPPYWDKASADLVKRDRILKKL
IPKFGPAHLVKRGDPFVTLARSVVGQQISVSSAQAVWAAIEAACPKLAPQQVIRLGLEKL
AACGLSKRKSEYIIDLAQHFVSGALHVDKWTSMEDEDVIAELTQIRGIGRWTAEMFLIFN
LSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDPESG
DT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggcaggaaagtgccggcaaagggcgcggttcgcgcggcgacacgctcgccg
gccaccggccgcgcgccggccgggaaggtcgccgccaagcgcgcgaccgacccgcgcgcg
ggcgctgtcaacggcgtggcgcattcgccggccgcgcgcggcgcggcgaaaccggcgcgt
gccgagagcgcggaacgcgaactcgcggccgagctcgtcgacggcgccgcgcgcaaggcc
cgtgcgaacgaggcggccttgccggagtcgtccgccgaggccgaggaagtggtgcgcccc
ccgtactgggacaaggccagcgccgatctcgtcaagcgcgatcgcattctcaagaagctg
attccgaaattcggcccggcgcatctggtcaagcgcggcgatcccttcgtcacgctggcg
cgctcggtggtcggccagcagatctcggtgagctcggcgcaggccgtgtgggcggcgatc
gaagccgcctgcccgaagctcgcgccgcagcaggtgatccgcctcggcctggagaagctc
gcggcctgcggcctgtccaagcgcaagtcggaatacatcatcgacctggcccagcatttt
gtttcgggcgccttgcacgtcgacaaatggacctcgatggaagacgaggacgtgatcgcc
gagctcacgcagatccgcggcatcggccgctggaccgccgagatgttcctgatcttcaac
ctgtcgcggcccgacgtgctgccgctcgacgaccccggcctgatccgcgcgatcagcgtc
aactacttcagcggtgaacccgtcacgcgcagcgaggcgcgcgaggtcgcagccaactgg
gagccgtggcgtactgtcgcaacctggtacatgtggcgcagccttgacccggaatccggt
gacacttga
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