Halalkalibacterium halodurans: BH0004
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Entry
BH0004 CDS
T00039
Symbol
recF
Name
(GenBank) DNA repair and genetic recombination
KO
K03629
DNA replication and repair protein RecF
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BH0004 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH0004 (recF)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BH0004 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
DUF2813
AAA_29
DUF2045
Motif
Other DBs
NCBI-ProteinID:
BAB03723
UniProt:
Q9RC99
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All DBs
Position
3662..4777
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AA seq
371 aa
AA seq
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MHIERLTLKQFRNYDELDVSFEPNVNVIIGENAQGKTNVIEAIYFLALAKSHRTARDKEL
IQWEAPFARIEGAFQKQNGPLSLHVVLSGKGKKVKVNGLEQRRLSDYIGAVNVVMFGPED
LNLVKGSPQIRRRFLDMELGQMSPVYLHQLAMYQKILLQRNHLLKQLFGKANSDPMLDVL
TDQLIEVAVEVTKKRFEFIQLLQRWAEEIHQAISRGKEKLVITYEPSVHVSEQLNLSKLR
EGFYQAYEQKKERERQRGTTLFGPHRDDLVFFVNDKDVQTYGSQGQQRTTALSLKLAEIE
LMKETVGDYPILLLDDVLSELDDYRQSHLLHAIQHRVQTFVTTTNVDGIDHQTLQEATIY
EVEQGSLKKKG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgcacattgagcgattaacgctaaagcagtttcgtaattatgatgaactcgacgtatcg
tttgaaccgaacgtaaatgtgatcatcggtgaaaatgctcaagggaagacgaatgtgatt
gaggcgatttattttttagcactggcgaaatcacatcgtaccgctcgtgacaaggagctc
attcagtgggaagcaccttttgcaagaatcgagggggcgtttcaaaaacagaacggtcca
ctttcgttacatgttgtcctttcaggaaaagggaaaaaagtaaaggttaacggacttgaa
caacggaggctaagtgattacatcggtgccgtaaacgtcgtcatgttcggcccagaagat
ttaaatctcgtgaaaggtagtccgcaaattaggcggcgctttctcgacatggagttaggt
caaatgagccctgtttatttacatcagctcgcaatgtaccaaaaaatccttttacagcgt
aaccatttgttaaagcagctctttggcaaagcgaattctgacccgatgctcgacgtactc
acagaccaactgattgaagtagctgtagaggtgacgaaaaagcggtttgaattcattcaa
ctgctccaacgatgggcggaagaaatccatcaggccatttctagagggaaagagaaacta
gtgattacgtatgaaccgtccgttcacgtatcagaacagttgaatttgtcgaaactaaga
gaaggattctatcaggcgtacgaacaaaagaaagagcgagaacgacaaaggggaacgaca
ttattcggaccgcaccgggatgatcttgtgttttttgtgaatgacaaggacgttcagacg
tacggctcccaaggtcaacaacggacgacggctctctccttaaagctagcagaaattgaa
ttgatgaaagagacggttggggactacccgatcttactgttagatgatgtgttatcagag
cttgatgattaccggcaatcccatttgctccatgcgattcaacatcgagtacaaacgttc
gtgacaacgacaaatgtggatgggattgatcatcaaaccttacaggaagcaacgatctat
gaagtagagcaagggtcgttgaaaaagaagggatag
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