Halalkalibacterium halodurans: BH0263
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Entry
BH0263 CDS
T00039
Symbol
sigW
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bha
Halalkalibacterium halodurans
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bha03021
]
BH0263 (sigW)
Transcription machinery [BR:
bha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BH0263 (sigW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
GerE
HTH_16
HTH_WhiA
HTH_24
HTH_IclR
UPF0122
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
BAB03982
UniProt:
Q9KG50
LinkDB
All DBs
Position
283538..284101
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AA seq
187 aa
AA seq
DB search
MDSIDKRLVREVRAGDEQAFAELVELYKDKVYQVAYRMVGNVHEAQDVAQEAFLRAYTNI
DTYDIQRKFSTWLFRIATNVAIDRLRKRKPDFHLEDPVQGADGLTIESQLAADEEPVDDQ
VIQMETRDWIQQEIQALPPKYRMAVLLKYMEDLSLKEISDILDLPVSTVKTRIHRGREAL
RKRMRHV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggacagtattgataagagacttgtgcgtgaagtgagggctggcgatgaacaagcattt
gccgagcttgtggagctttataaagataaagtgtatcaagtagcctatcgaatggtagga
aatgtgcatgaagctcaggatgtagcacaagaagcgtttttgcgggcatatacaaatatt
gatacctacgatattcaaaggaaattctccacgtggttgtttcgcattgccacaaatgtg
gcgattgatcgacttcgcaaacggaaaccggacttccatttagaggatccagtccaaggg
gcagatgggttaacgattgaatctcagctagcggctgatgaggagcctgtggatgaccaa
gtcattcaaatggaaacgagagattggattcagcaagaaatccaagcgttgccaccaaaa
tatcgaatggctgtccttttgaaatacatggaagatctatcgttgaaggagatcagtgac
attcttgatttgcctgtatccacagtcaagacgagaatccaccgcggtcgtgaagcgctg
agaaagcgaatgcgacatgtgtag
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integrated database retrieval system
