KEGG   Bordetella holmesii 44057: D558_0195
Entry
D558_0195         CDS       T03379                                 
Symbol
serS
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
bhm  Bordetella holmesii 44057
Pathway
bhm00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    D558_0195 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bhm01007]
    D558_0195 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bhm03016]
    D558_0195 (serS)
Enzymes [BR:bhm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     D558_0195 (serS)
Amino acid related enzymes [BR:bhm01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   D558_0195 (serS)
Transfer RNA biogenesis [BR:bhm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    D558_0195 (serS)
 Prokaryotic type
    D558_0195 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N JIP_LZII FapA Cep57_MT_bd Tropomyosin Uso1_p115_C
Other DBs
NCBI-ProteinID: AIT24889
LinkDB
Position
complement(180050..181405)
AA seq 451 aa
MLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQ
LKGKGAPEAEVQAVMAESQALPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGVSS
DENVEVRRWLPGAADERGIPAALGFEVRDHVAVGEPLGLDFDLAARLSGARFSFMRGQMA
RLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEPK
VDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDTR
GMIRQHQFDKVEMVQIAHPEHSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSAK
TYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQNKPEYVHTLNGSGLAVGRALV
AVLENCQQADGSVRVPAVLQPYMGGLTVLEP
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgctagatccgatactgctgcgcaaagacctgcaaaccgtcgtcgaccgcctcaagagc
cgtggcgtcgatttcgacatcgcccggttcaacgagctggagtcccgccgcaaggccgtc
cagaccgaaaccgagtcgcagcaggcgcgccgcaatgccttggccaagcagatcggccag
ctcaagggcaaaggcgcacccgaagcggaagtgcaggccgtgatggccgagtcgcaggcc
ttgccggcccggctcaaggcgctcgaggacgaactggcgcagacgcaggcgcaactcaac
gacctgctgatgtccgtgcccaacctgccgcacgccagcgtgccgcagggcgtgtccagc
gacgagaacgtcgaggtgcggcgttggctgccgggcgcggccgacgagcgcggcatccct
gcggcgctgggtttcgaggtgcgggatcacgtggcggtgggcgagccgctgggcctggat
ttcgatctggccgcacggctgtcgggcgcgcgcttttctttcatgcgcggccagatggcg
cgcctgcaccgcgcgctggcgcagttcatgctggacttgcagacgggcacgcatggctac
accgagtgctacacgccctacatcgtcaacagctcgaccttgttcggcaccggccaactg
cccaagttcaaggacgacatgttcttcgtcaccaagggcggcggcgacgacgagcccaag
gtcgacgagcagggcaacccgctggcgcgcgaagaccaatacctgatctcgacctcggaa
atcaccctgaccagcgtggtgcgcgagaccatcgtggccggcgccgacctgccgctgcgc
ctgaccgcgcatacgccgtgcttccgctccgaagccggcagcggcgggcgcgatacgcgc
ggcatgatccgccagcaccagttcgacaaggtcgagatggtgcagatcgcccatcccgag
cattcgtacgaggcgctcgaggaaatggtcggccatgccgagcgcgtactgcagctgctg
gagctgccgtaccgcgtcatgctgctgtgcaccggcgacatgggtttcggctcggccaag
acctacgacctggaggtctggctgccggcgcaggatacctggcgcgagatctcctcggtt
tccaactgcgaaacattccaggcgcgccgcatgcaggcccgcttccgtaacgcgcagaac
aagcccgaatacgtgcatacgctcaatgggtccgggctggccgtgggccgcgccctggtg
gccgtgctggaaaactgccagcaagccgacggcagcgtgcgggtgccggccgtgctgcag
ccctacatgggcggcctgaccgttctcgaaccttga

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