Bordetella holmesii 44057: D558_2152
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Entry
D558_2152 CDS
T03379
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00470
D-Amino acid metabolism
bhm00550
Peptidoglycan biosynthesis
bhm01100
Metabolic pathways
bhm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D558_2152
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D558_2152
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
D558_2152
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
D558_2152
Enzymes [BR:
bhm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
D558_2152
Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
Precursor biosynthesis
Amino acid ligase
D558_2152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATPgrasp_ST
ATP-grasp_3
TTL
ATP-grasp_4
ATPgrasp_YheCD
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AIT26814
LinkDB
All DBs
Position
2031505..2032458
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AA seq
317 aa
AA seq
DB search
MTHDFGKVGVLYGGRSAEREVSLMSGAGVHDALRSAGVDAHLFDTGLQGLAELQAAGFDR
VFIALHGRYGEDGAIQGALELLNIPYTGSGVAASAVAMDKILTKRIWLQHGLPTPAFEEI
DGQTDLRQVPDRLGLPLILKPPHEGSTVGITKVAGYSDIKQAYASASHFDEVVLAEQFVR
GRELTVAVLGTGRGARALPVIEIVAPDGNYDYQNKYFTDDTKYFCPADLPEGVAADVERI
AVLAYRVLGCEGWGRADFILDDQNRPWLLELNTSPGMTSHSLVPMAARAVGLNYADLCVA
ILAEASCKLRAAARTEQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgatttcggaaaagttggcgtgctctatggcggccggtccgccgagcgtgag
gtctcgttgatgtcgggcgcgggagtgcatgacgcactgcgcagcgcgggcgtggatgct
catctgttcgataccggtttgcaggggttggccgagttgcaggcggcaggattcgatcgg
gtcttcattgcgttgcatggccgttatggcgaggatggcgccattcagggggcgctggag
cttctgaacatcccctacaccggcagtggcgtggccgcgtcggcggtggcgatggacaag
atactgactaagcgcatctggctgcagcatggcctgccgacgcccgccttcgaagaaatc
gatgggcagaccgatctgcgccaggtgccggaccgtttggggctgccgctcattctcaag
ccgccgcatgagggttcgacggtcgggatcaccaaggtcgccggctattcggatatcaag
caggcttacgcctctgcatcgcatttcgacgaagtcgtcctggccgagcagttcgtgcgc
ggccgcgagttgaccgtcgccgtgctgggcaccgggcggggcgcccgcgccttgcctgtc
attgagatcgtcgcgcccgatggcaactacgactaccagaataagtatttcaccgacgac
accaaatatttctgcccggccgatctgcccgagggcgtggccgcggacgtcgagcgaatc
gccgtgctggcctatcgtgttctgggttgcgaaggatgggggcgcgccgacttcatcctc
gatgaccagaaccggccctggctgctggaattgaatacatcgcctggcatgacaagccac
tccttggtccccatggctgctcgcgcggtcggcctgaactacgccgacctttgcgtggcc
attctggccgaagcctcctgcaagctgcgcgctgcggcgcgtactgaacaatag
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