KEGG   Bordetella holmesii 44057: D558_2502
Entry
D558_2502         CDS       T03379                                 
Name
(GenBank) exonuclease family protein
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bhm  Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhm03019]
    D558_2502
   03009 Ribosome biogenesis [BR:bhm03009]
    D558_2502
Messenger RNA biogenesis [BR:bhm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D558_2502
Ribosome biogenesis [BR:bhm03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    D558_2502
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 pP_pnuc_1
Other DBs
NCBI-ProteinID: AIT27163
LinkDB
Position
2362239..2362784
AA seq 181 aa
MAANENRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQDDSVLDAMDN
WNKSTHGKSGLIDKVRASTLTEAQAEQQLIEFLAQHVPAGKSPLCGNTISQDRRFMFAYM
PALERFFHYRNLDVSTLKELARRWAPAVYKGFEKKSRHEALADIYESIDELKYYREHFLK
V
NT seq 546 nt   +upstreamnt  +downstreamnt
atggctgccaacgaaaatcgcctggtctggctcgacatggaaatgaccgggcttgatcct
gagaaagaacgcatcattgaagtcgccgtcgtggtgaccgaaccggatcttacggtcgtg
gccgaggggccggtactcgtcgtacatcaggacgacagcgtgctcgatgccatggacaat
tggaacaagtccacccacggcaagagcggcctgatcgacaaggtgcgcgcctccacgctc
accgaggcccaggccgagcagcaactgatcgaatttctggctcagcacgtgccggccggt
aagtcgccgctgtgcggcaacaccatcagccaggaccgccggttcatgttcgcctatatg
ccagcgctggagcgtttcttccactatcgcaatctggatgtcagcacgctgaaggagttg
gcgcggcgctgggctccggcggtctacaagggcttcgaaaagaaaagccgccacgaagcg
ctggccgacatttacgagtccatcgatgagctcaaatactatcgtgagcacttcctgaaa
gtgtga

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