Bordetella holmesii 44057: D558_2502
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Entry
D558_2502 CDS
T03379
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhm03019
]
D558_2502
03009 Ribosome biogenesis [BR:
bhm03009
]
D558_2502
Messenger RNA biogenesis [BR:
bhm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D558_2502
Ribosome biogenesis [BR:
bhm03009
]
Eukaryotic type
Pre-60S particles
RNases
D558_2502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AIT27163
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All DBs
Position
2362239..2362784
Genome browser
AA seq
181 aa
AA seq
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MAANENRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQDDSVLDAMDN
WNKSTHGKSGLIDKVRASTLTEAQAEQQLIEFLAQHVPAGKSPLCGNTISQDRRFMFAYM
PALERFFHYRNLDVSTLKELARRWAPAVYKGFEKKSRHEALADIYESIDELKYYREHFLK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaacgaaaatcgcctggtctggctcgacatggaaatgaccgggcttgatcct
gagaaagaacgcatcattgaagtcgccgtcgtggtgaccgaaccggatcttacggtcgtg
gccgaggggccggtactcgtcgtacatcaggacgacagcgtgctcgatgccatggacaat
tggaacaagtccacccacggcaagagcggcctgatcgacaaggtgcgcgcctccacgctc
accgaggcccaggccgagcagcaactgatcgaatttctggctcagcacgtgccggccggt
aagtcgccgctgtgcggcaacaccatcagccaggaccgccggttcatgttcgcctatatg
ccagcgctggagcgtttcttccactatcgcaatctggatgtcagcacgctgaaggagttg
gcgcggcgctgggctccggcggtctacaagggcttcgaaaagaaaagccgccacgaagcg
ctggccgacatttacgagtccatcgatgagctcaaatactatcgtgagcacttcctgaaa
gtgtga
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