Bordetella holmesii 44057: D558_2843
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Entry
D558_2843 CDS
T03379
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhm03021
]
D558_2843
Transcription machinery [BR:
bhm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D558_2843
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
HTH_30
DUF134
Motif
Other DBs
NCBI-ProteinID:
AIT27499
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Position
2677821..2678345
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AA seq
174 aa
AA seq
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MSGDIEALIVACIPSLRRYARGLTGDRDRADDLVQDTLERAWRRYSRWQRRGELRAWMFG
IMHNHFIDGLRAQKRQPELAGETALQDLPARPTQDDGLAVRDLDRSLARLSADQRAIILL
ISVEEFSYEEAARVLDVPIGTVMSRLSRARERLAALLAEAPPTRVAATLHRIKP
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgatatcgaagccctgatcgtggcctgcattcccagcctgcggcgctatgcg
cgggggctgacgggcgatcgtgatcgggccgatgatctggtgcaggacacgctggagcgg
gcctggcgccgctattcgcgctggcagcgccgtggcgagctgcgggcctggatgttcggc
atcatgcacaaccatttcatcgacgggctgcgcgcgcaaaagcgccagcccgagctcgcc
ggcgagacggctctgcaggacttgcctgcgcgccccacgcaggatgacggtctggccgtg
cgcgatctcgaccgctctttggcccgactgtcggccgaccaacgcgccattattttgctg
atctcggtggaggagttcagctatgaggaagcggcccgtgttctggacgtgccgataggc
accgtcatgtcgcgcctgtcgcgagcccgtgagcggcttgccgctttgctggccgaggca
ccgcccacgcgggttgcggccactttgcaccgcatcaaaccatga
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