Bartonella henselae BM1374163: PRJBM_00866
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Entry
PRJBM_00866 CDS
T03068
Name
(GenBank) Putative ribonuclease Jc
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bhn
Bartonella henselae BM1374163
Pathway
bhn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRJBM_00866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhn03019
]
PRJBM_00866
Messenger RNA biogenesis [BR:
bhn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PRJBM_00866
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GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
RNase_J_C
Lactamase_B
Transposase_22
Motif
Other DBs
NCBI-ProteinID:
CDO40246
UniProt:
X5M4V6
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Position
complement(988127..989803)
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AA seq
558 aa
AA seq
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MVAANKDEFVFLPLGGVGEIGMNLAAYGFGPQNLREWLLVDMGVSFAGPELPGADLILPD
IRFLENEKHNVRGLVLTHAHEDHYGAVLDLWPKLKVPLYCTPFTAGLLESKRQSDFDSHQ
ISLNIFQVGDCFQAGPFAVEAIAVNHSIPESVSLAITTSLGTVIHTGDWKIDHTPSFGAV
TDEKRFRALGKKGILALLCDSTNACRDGISPSEQQVQTSLSEIIAKAEGRVALATFASNV
GRIRSIALAAESVGRQVLVVGRSLKRSIMIAQELGYMNGLAPFVSEDDYGYIPRKEIVLI
VTGSQGESRAALAKLSRNEMRNLQLSAGDTVIYSSRSIPGNEKSIIEIQNRFIDMGIKII
TNEDALVHVSGHPRRLELLKMYDWVKPQILVPVHGEAMHLAAQADLARQAGIKMVADIRN
GNMLRLAPEPVKVIDQVPVGRLYKDGCLIGDEDELGIRERRKLSYAGYVAISLQMNSKHD
LQGDIGLTTFGLPESNEKGESLKDILLDVVENTIYNIPRIKRKNNELIQEATRRAVRAAV
NEAWQKKPVCTVFLHRSK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagccaacaaagatgagtttgtttttttacctttaggaggagtaggtgaaata
gggatgaatcttgctgcttatggatttggtcctcaaaatcttcgtgaatggcttcttgtt
gatatgggagttagttttgctggtcctgaattaccaggagcagatcttatcctccctgat
attcgttttctagaaaatgaaaaacacaatgtgcgtggtctcgttttaacacacgctcat
gaagatcattatggtgctgttcttgatttatggccaaaacttaaagttccactttactgt
acaccttttacagcaggattattggagagtaaaaggcaatcagattttgactctcatcaa
atttcactcaatatttttcaagttggtgattgctttcaggctggtccctttgcagtagag
gcaattgccgttaatcattcaattccagaatctgtatctttggcaattacaacatcctta
ggcactgtgattcatactggcgattggaaaattgatcatacaccttcatttggggctgta
acggatgaaaaacgctttcgtgctttaggcaaaaaaggtattttagcattactttgtgat
tccacaaatgcttgtcgggatggtatatcaccatcagagcagcaagttcagacaagtctc
tctgaaattattgcaaaagctgaagggcgcgttgcacttgcaacttttgcgtctaatgtt
ggtcggatacgttcaattgctcttgcagctgaatctgttgggcgccaagttcttgtcgtt
gggcgctctcttaagcggagcattatgattgcgcaagagcttggttatatgaatggtttg
gcgccatttgtttcggaagatgattatggttacattccgcgaaaagaaattgttttaatt
gtaacaggtagtcaaggtgagtctcgtgctgccttagctaaactttcacgaaatgaaatg
agaaaccttcaactttctgctggtgatacagttatttattcttcacgaagtattccaggg
aacgaaaaatctattattgagatacaaaatcgtttcatcgatatgggaattaaaataatt
acgaatgaagatgctcttgttcacgtttcaggtcatcctcgtcgtttagagcttttaaag
atgtatgattgggtaaaaccacagatacttgttcctgtccatggtgaggcaatgcatctt
gctgctcaagcagatttagcacgtcaagcaggtattaaaatggtcgccgatattagaaat
ggtaatatgctgcgtcttgcgccagagcctgtaaaggttattgatcaagttcctgttggt
cggctttataaagatggttgccttattggtgatgaagatgagttagggattcgtgagcgt
cgcaaattaagttatgcaggttatgttgctatttctctccaaatgaatagcaaacatgat
ttacagggcgatattggtttgacaacatttggtttacctgaaagtaatgaaaagggggaa
agtttaaaagatattctcttagatgtcgtagaaaatactatctataatattccacgcatt
aaacgaaaaaataatgaacttattcaggaagcaacgcggcgggcagtaagagcagccgtt
aatgaggcttggcaaaaaaaacctgtctgtacagtttttttacatcggtcaaaataa
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