Bartonella henselae BM1374163: PRJBM_01040
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Entry
PRJBM_01040 CDS
T03068
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bhn
Bartonella henselae BM1374163
Pathway
bhn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRJBM_01040 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhn03019
]
PRJBM_01040 (rhlE)
Enzymes [BR:
bhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PRJBM_01040 (rhlE)
Messenger RNA biogenesis [BR:
bhn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PRJBM_01040 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDO40412
LinkDB
All DBs
Position
complement(1161325..1162707)
Genome browser
AA seq
460 aa
AA seq
DB search
MNVNRENIFTKLGLSALLVKNLTIAGMSKPKPIQEQAIPMMLKGHDILGIAQTGSGKTLA
FSLPILSQILALGDKRFPKTARALILAPTRELAVQIDETIRAVAKGTHLSTCLIFGGVSR
LKQIKRMEAGVDILIATPGRLRDLIREKYVDLSQSRFLILDEADRMLDMGFIHDIRHIVK
LLHQVRQTALFSATMPKEITTLAKCLLNDPVKIEVSPQGTTAAEIAQKLYCVPTCEKKNV
LGKLLTNPDFVSVIVFTRTKYCADAVTRNLASRGYSVATIHGNKSQSARQSALKAFRERS
VRILVATDIAARGIDIPGISHVINYDLPDEAESYVHRIGRTGRNGASGEALTLFDEGVEQ
MRLRAVERLICMRLVRETIPEQFAAFPEKPLVIEGIEKENIKGPHFRKSKRQKWFKSHKD
NAAQSEGRKSSSQSERHRKAKAIAKRAKSFHSRKSVNKVA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtaaatagagaaaatattttcacaaaattaggcttatctgctcttttggttaaa
aacttgaccattgctggtatgagtaaacctaaacctattcaagaacaagctattccaatg
atgcttaaaggccatgatattctgggaattgcacagacaggttctggaaagaccttggca
tttagtttacctattttaagtcagattttggctttgggtgataagcgttttcctaaaact
gcacgcgctttgattttagctcctacgcgtgagcttgctgttcagattgatgaaacaatt
cgtgcagttgcgaaaggaacacacctttcaacatgtctcatttttggtggggtatcacgt
ttgaaacaaattaaacgcatggaagcaggtgtggatattttgatagcaacgccaggtcgt
ttaagggatcttattcgtgaaaaatacgttgatctttctcaatcacgttttttgattctg
gatgaggcagatcgtatgttagatatgggctttattcatgatatacggcatattgtaaaa
cttttgcatcaagtacgtcaaacagcacttttttctgcgacaatgccgaaggaaattacc
acacttgcaaagtgtctgctcaatgatccagtaaaaatagaggtttctcctcaagggact
acggctgcggaaattgctcaaaaattatattgtgttcctacatgtgaaaaaaagaatgtt
ttaggtaagcttttgacaaatccagattttgtttcggttattgtttttactcgaaccaaa
tactgtgctgatgctgtcacgcggaatttagcaagtagaggatattctgttgcgacaatt
catggaaataaatcacaaagtgctcggcagtctgcattgaaagcttttcgtgaaagatca
gtacggattcttgttgcaacagatattgcagcgcgtggtattgatataccaggcataagc
cacgttattaattacgatttaccagatgaagctgaaagttatgtgcatcgtattggtcgc
acaggacgcaatggcgcatctggtgaggcactaacactttttgatgaaggtgtggagcag
atgcggttgcgtgctgtagagcgcttgatttgtatgagattggtgcgtgaaactatacca
gaacagtttgctgcttttccagaaaagcctcttgtgatagaagggatagaaaaagaaaac
attaagggacctcattttagaaaatctaagcgtcagaaatggtttaagagtcacaaagat
aatgcagcacagtcagagggaagaaagtcttcgtctcaaagtgaaagacacagaaaagca
aaagcaatagcaaaacgtgcgaagtcttttcattctcgcaagtcagtaaacaaggtagct
tga
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